RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 KRT7P08729 469 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 HLA-EP13747 358 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 PRKCHP24723 683 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 IL1R2P27930 398 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 HOXC13P31276 330 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 MAN1A1P33908 653 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 ARL4AP40617 200 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 SLC1A1P43005 524 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 CTSOP43234 321 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 YBEYP58557 167 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 SEMA3BQ13214 749 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 SIM2Q14190 667 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 POLD3Q15054 466 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 CA9Q16790 459 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 HNRNPA1L2Q32P51 320 aaKnown RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 ZFYVE27Q5T4F4 411 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 ARTNQ5T4W7 220 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 DAB2IPQ5VWQ8 1189 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 KIAA1211LQ6NV74 962 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 PRR23BQ6ZRT6 265 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 RFX8Q6ZV50 586 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 CEP68Q76N32 757 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 TMPRSS6Q8IU80 811 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 MAP7D3Q8IWC1 876 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 TXLNBQ8N3L3 684 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 RTL3Q8N8U3 475 aaKnown RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 KCTD6Q8NC69 237 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 MDGA1Q8NFP4 955 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 OR2T3Q8NH03 318 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 TEKT4Q8WW24 435 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 RFFLQ8WZ73 363 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 ANP32BQ92688 251 aaKnown RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 PRCCQ92733 491 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 CALR3Q96L12 384 aaKnown RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 MRGPRX3Q96LB0 322 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 PEBP4Q96S96 227 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 PRDM16Q9HAZ2 1276 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 ATP13A1Q9HD20 1204 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 PRSS16Q9NQE7 514 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 ZNF212Q9UDV6 495 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 ANGPTL2Q9UKU9 493 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 FRYLO94915 3013 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 CACNA1GO43497 2377 aa10.88□□□□□ -0.67
PTCH1-225ENST00000551845 HELZP42694 1942 aaKnown RBP10.88□□□□□ -0.67
PTCH1-225ENST00000551845 KIF26AQ9ULI4 1882 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ZFHX4Q86UP3 3567 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 EDDM13A0A1B0GTR0 161 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 CXorf51AA0A1B0GTR3 108 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 TTC34A8MYJ7 566 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 H3BRJ5 948 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 MAP3K13O43283 966 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 RNASEH1O60930 286 aaKnown RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 RPP40O75818 363 aaKnown RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ACADMP11310 421 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 GOT1P17174 413 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ERCC2P18074 760 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 GABRG2P18507 467 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 NUMBP49757 651 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 CAMK2GQ13555 558 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 KRT81Q14533 505 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 GSE1Q14687 1217 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 DLG2Q15700 870 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 DPYSL2Q16555 572 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 SMTNL2Q2TAL5 461 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 RAD9BQ6WBX8 426 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 METTL3Q86U44 580 aaKnown RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 C11orf74Q86VG3 221 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ZNF354CQ86Y25 554 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 UMODL1-AS1Q8N2C9 162 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 LZTR1Q8N653 840 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ZNF366Q8N895 744 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 DCAF4L2Q8NA75 395 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 OR7D4Q8NG98 312 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 GAB3Q8WWW8 586 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ARHGEF2Q92974 986 aaKnown RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ERLEC1Q96DZ1 483 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 SIPA1Q96FS4 1042 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 MYO19Q96H55 970 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 MRGPRX1Q96LB2 322 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 KCTD15Q96SI1 283 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 ACE2Q9BYF1 805 aaPredicted RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 TPSD1Q9BZJ3 242 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 FBRSQ9HAH7 460 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 NDFIP2Q9NV92 336 aa10.87□□□□□ -0.67
PTCH1-225ENST00000551845 CWC15Q9P013 229 aaKnown RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 MAP1BP46821 2468 aaKnown RBP10.87□□□□□ -0.67
PTCH1-225ENST00000551845 A0A0A6YYK5 440 aaPredicted RBP10.86□□□□□ -0.67
PTCH1-225ENST00000551845 KDELR3O43731 214 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 NRDCO43847 1150 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 ATP9BO43861 1147 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 SNAP91O60641 907 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 TCF4P15884 667 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 ACVRL1P37023 503 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 CLCN6P51797 869 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 NDST2P52849 883 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 HADHBP55084 474 aaKnown RBP10.86□□□□□ -0.67
PTCH1-225ENST00000551845 CDH6P55285 790 aa10.86□□□□□ -0.67
PTCH1-225ENST00000551845 GEMIN4P57678 1058 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms