RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	FSCB	Q5H9T9	825 aa		5	□□□□□ -1.61
CNOT2-222	ENST00000550155	KLHL17	Q6TDP4	642 aa		5	□□□□□ -1.61
CNOT2-222	ENST00000550155	RBMXL3	Q8N7X1	1067 aa	Known RBP	5	□□□□□ -1.61
CNOT2-222	ENST00000550155	KATNAL1	Q9BW62	490 aa		5	□□□□□ -1.61
CNOT2-222	ENST00000550155	POLDIP3	Q9BY77	421 aa	Known RBP	5	□□□□□ -1.61
CNOT2-222	ENST00000550155	ELAC1	Q9H777	363 aa	Known RBP	5	□□□□□ -1.61
CNOT2-222	ENST00000550155	CD93	Q9NPY3	652 aa		5	□□□□□ -1.61
CNOT2-222	ENST00000550155	C19orf53	Q9UNZ5	99 aa	Predicted RBP	5	□□□□□ -1.61
CNOT2-222	ENST00000550155	EVPL	Q92817	2033 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	HNRNPR	O43390	633 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	LIAS	O43766	372 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	CCNT1	O60563	726 aa	Known RBP	4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	ACTL6B	O94805	426 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	GLUD1	P00367	558 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	PRPH2	P23942	346 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	GLUD2	P49448	558 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	AP2B1	P63010	937 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	CDK18	Q07002	472 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	PFKFB4	Q16877	469 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	PRAMEF19	Q5SWL8	479 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	DLK2	Q6UY11	383 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	PALB2	Q86YC2	1186 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	KDM1B	Q8NB78	822 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	KCNJ9	Q92806	393 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	CHST12	Q9NRB3	414 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	TMLHE	Q9NVH6	421 aa		4.99	□□□□□ -1.61
CNOT2-222	ENST00000550155	GRM8	O00222	908 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	TMCC1	O94876	653 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	LCAT	P04180	440 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	GYS1	P13807	737 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	AVPR1A	P37288	418 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	ZBTB16	Q05516	673 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155		Q0VFX4	171 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	HEPHL1	Q6MZM0	1159 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	VPS52	Q8N1B4	723 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	C3orf49	Q96BT1	292 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	IFT27	Q9BW83	186 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	HDHD5	Q9BXW7	423 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	ZDHHC7	Q9NXF8	308 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	NDUFAF4	Q9P032	175 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155	DAPP1	Q9UN19	280 aa		4.98	□□□□□ -1.61
CNOT2-222	ENST00000550155		A0A087WV62	115 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	ASAP2	O43150	1006 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	MYZAP	P0CAP1	466 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	SETSIP	P0DME0	302 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	SERPINA4	P29622	427 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	RRP1	P56182	461 aa	Known RBP	4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	TMPRSS3	P57727	454 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	TNFAIP2	Q03169	654 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	TRAF1	Q13077	416 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	DUSP6	Q16828	381 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	TMEM268	Q5VZI3	342 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	XRRA1	Q6P2D8	792 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	ZNF367	Q7RTV3	350 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	HORMAD2	Q8N7B1	307 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	SLC2A12	Q8TD20	617 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	SLC35F5	Q8WV83	523 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	CADM1	Q9BY67	442 aa	Known RBP	4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155		Q9N2J8	555 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	TMEM248	Q9NWD8	314 aa		4.97	□□□□□ -1.61
CNOT2-222	ENST00000550155	C17orf102	A2RUQ5	167 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	KIF1C	O43896	1103 aa	Known RBP	4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	HEXIM1	O94992	359 aa	Known RBP	4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	UNG	P13051	313 aa	Predicted RBP	4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	PRKCH	P24723	683 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	GAS1	P54826	345 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	PUM3	Q15397	648 aa	Known RBP	4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	SHB	Q15464	509 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	IZUMO4	Q1ZYL8	232 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	GXYLT1	Q4G148	440 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	MTFR2	Q6P444	385 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	ATG16L2	Q8NAA4	619 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	OR1N1	Q8NGS0	311 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	OR14A16	Q8NHC5	309 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	SVIP	Q8NHG7	77 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	ARRDC3	Q96B67	414 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	GFM1	Q96RP9	751 aa	Known RBP	4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	SEPSECS	Q9HD40	501 aa	Known RBP	4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	LRFN1	Q9P244	771 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	IL36RN	Q9UBH0	155 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	CDH22	Q9UJ99	828 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	LZTS1	Q9Y250	596 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155	PCDHGB1	Q9Y5G3	927 aa		4.96	□□□□□ -1.62
CNOT2-222	ENST00000550155		I6L893	689 aa	Predicted RBP	4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	SYT5	O00445	386 aa		4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	SYN3	O14994	580 aa		4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	RNMT	O43148	476 aa	Known RBP	4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	FCGR2A	P12318	317 aa		4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	ENO3	P13929	434 aa	Predicted RBP	4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	TYK2	P29597	1187 aa		4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	SKIV2L2	P42285	1042 aa	Known RBP	4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	RFX5	P48382	616 aa	Predicted RBP	4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	ART1	P52961	327 aa		4.95	□□□□□ -1.62
CNOT2-222	ENST00000550155	ABAT	P80404	500 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms