RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ATP13A1Q9HD20 1204 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 FAM114A2Q9NRY5 505 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 DMGDHQ9UI17 866 aaKnown RBP17.78■□□□□ 0.44
LETMD1-220ENST00000549686 DENND4AQ7Z401 1863 aa17.78■□□□□ 0.44
LETMD1-220ENST00000549686 BHMG1C9JSJ3 638 aaPredicted RBP17.77■□□□□ 0.44
LETMD1-220ENST00000549686 RNF103O00237 685 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 CACNG3O60359 315 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 ADCY8P40145 1251 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 RENBPP51606 427 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 CLCN6P51797 869 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 GDF10P55107 478 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 GEMIN4P57678 1058 aaKnown RBP17.77■□□□□ 0.44
LETMD1-220ENST00000549686 SLC7A5Q01650 507 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 GUCY2DQ02846 1103 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 ITPRIPL1Q6GPH6 555 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 WDR93Q6P2C0 686 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 PARM1Q6UWI2 310 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 PCGF5Q86SE9 256 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 METTL3Q86U44 580 aaKnown RBP17.77■□□□□ 0.44
LETMD1-220ENST00000549686 BBS5Q8N3I7 341 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.77■□□□□ 0.44
LETMD1-220ENST00000549686 FGF14Q92915 247 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 ACDQ96AP0 544 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 KXD1Q9BQD3 176 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 TRIM51Q9BSJ1 452 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 SPON2Q9BUD6 331 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 C10orf88Q9H8K7 445 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 ANKZF1Q9H8Y5 726 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 EPB41L5Q9HCM4 733 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 GDF3Q9NR23 364 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.77■□□□□ 0.44
LETMD1-220ENST00000549686 VPS28Q9UK41 221 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 OR51B4Q9Y5P0 310 aa17.77■□□□□ 0.44
LETMD1-220ENST00000549686 V9GYY5 206 aaPredicted RBP17.77■□□□□ 0.44
LETMD1-220ENST00000549686 A0A0D9SEW6 157 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 SMAPO00193 183 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 NEBLO76041 1014 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 CCNB1P14635 433 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 ITIH2P19823 946 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 PTPN3P26045 913 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 TNFRSF8P28908 595 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 ACVRL1P37023 503 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 CSKP41240 450 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 CAV1Q03135 178 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 TNK2Q07912 1038 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 WASHC5Q12768 1159 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 CALCOCO2Q13137 446 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 SMAD2Q15796 467 aaKnown RBP17.76■□□□□ 0.43
LETMD1-220ENST00000549686 PREPLQ4J6C6 727 aaPredicted RBP17.76■□□□□ 0.43
LETMD1-220ENST00000549686 TEX44Q53QW1 395 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 FSCBQ5H9T9 825 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 RETSATQ6NUM9 610 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 ARHGEF18Q6ZSZ5 1173 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.76■□□□□ 0.43
LETMD1-220ENST00000549686 NETO2Q8NC67 525 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 OR7D4Q8NG98 312 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 CASKIN2Q8WXE0 1202 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 PPM1EQ8WY54 764 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 BHMTQ93088 406 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 ASIC4Q96FT7 647 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 SNF8Q96H20 258 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 IL12RB2Q99665 862 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 ECT2Q9H8V3 914 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 PLK2Q9NYY3 685 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 SEPT10Q9P0V9 454 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 WHRNQ9P202 907 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 KLHL8Q9P2G9 620 aaPredicted RBP17.76■□□□□ 0.43
LETMD1-220ENST00000549686 FBXO10Q9UK96 956 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 DOCK4Q8N1I0 1966 aa17.76■□□□□ 0.43
LETMD1-220ENST00000549686 KCNK1O00180 336 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 ARSAP15289 507 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 RPL22P35268 128 aaKnown RBP17.75■□□□□ 0.43
LETMD1-220ENST00000549686 FDFT1P37268 417 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 MRPS25P82663 173 aaKnown RBP17.75■□□□□ 0.43
LETMD1-220ENST00000549686 SULT2A1Q06520 285 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 SLC20A2Q08357 652 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 LMAN2Q12907 356 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 GPS1Q13098 491 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 RUNX3Q13761 415 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 ELF2Q15723 593 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 ANKRD20A2Q5SQ80 823 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 ANKRD20A1Q5TYW2 823 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 MARC1Q5VT66 337 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 ANKRD20A3Q5VUR7 823 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 TRIM68Q6AZZ1 485 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 ARHGAP36Q6ZRI8 547 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 TEX26Q8N6G2 289 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 OR52K2Q8NGK3 314 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 WFIKKN2Q8TEU8 576 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 ALG14Q96F25 216 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 LMLNQ96KR4 655 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 TEKT5Q96M29 485 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 EBF3Q9H4W6 596 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 PDFQ9HBH1 243 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 IGSF9Q9P2J2 1179 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 UBA2Q9UBT2 640 aaPredicted RBP17.75■□□□□ 0.43
LETMD1-220ENST00000549686 NUMBLQ9Y6R0 609 aa17.75■□□□□ 0.43
LETMD1-220ENST00000549686 UQCRHLA0A096LP55 91 aa17.74■□□□□ 0.43
LETMD1-220ENST00000549686 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.74■□□□□ 0.43
LETMD1-220ENST00000549686 C2CD4DB7Z1M9 353 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms