RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 HERC2P3Q9BVR0 1158 aa10.19□□□□□ -0.78
RAB5B-206ENST00000549505 MANSC1Q9H8J5 431 aa10.19□□□□□ -0.78
RAB5B-206ENST00000549505 TREX1Q9NSU2 369 aa10.19□□□□□ -0.78
RAB5B-206ENST00000549505 BFARQ9NZS9 450 aa10.19□□□□□ -0.78
RAB5B-206ENST00000549505 KLHL8Q9P2G9 620 aaPredicted RBP10.19□□□□□ -0.78
RAB5B-206ENST00000549505 PLXNA4Q9HCM2 1894 aa10.19□□□□□ -0.78
RAB5B-206ENST00000549505 ALDOAP04075 364 aaKnown RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ALOX15P16050 662 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 NFKB1P19838 968 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ADRA1DP25100 572 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 SERPINB4P48594 390 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 LIMK2P53671 638 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 USP46P62068 366 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 OCRLQ01968 901 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 SPRED3Q2MJR0 410 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 PARP15Q460N3 678 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ICE2Q659A1 982 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 TPGS2Q68CL5 300 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 RSPO2Q6UXX9 243 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 IMP4Q96G21 291 aaKnown RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ZYG11BQ9C0D3 744 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 MYLK2Q9H1R3 596 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 SLC25A51Q9H1U9 297 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 STN1Q9H668 368 aaKnown RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 PDFQ9HBH1 243 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 SAR1AQ9NR31 198 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 TBX21Q9UL17 535 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 GFRA2O00451 464 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 GLRA3O75311 464 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 DCTN3O75935 186 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 MAP3K6O95382 1288 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 MPOP05164 745 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 TBX4P57082 545 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ACVR1Q04771 509 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 PAN2Q504Q3 1202 aaKnown RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 PCID2Q5JVF3 399 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 SLC39A5Q6ZMH5 540 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 CDHR3Q6ZTQ4 885 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 PPM1NQ8N819 430 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 CCNYQ8ND76 341 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 GDAP1Q8TB36 358 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 HASPINQ8TF76 798 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 TTPALQ9BTX7 342 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 TLE6Q9H808 572 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 KCNK13Q9HB14 408 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 GMIPQ9P107 970 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 EMCNQ9ULC0 261 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ARHGAP42A6NI28 874 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 BPGMP07738 259 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 SRGAP2BP0DMP2 458 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 COL6A2P12110 1019 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ARCN1P48444 511 aaKnown RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 PDPK2PQ6A1A2 396 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 CNKSR3Q6P9H4 555 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ATPAF2Q8N5M1 289 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 BCL7CQ8WUZ0 217 aaPredicted RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 C19orf43Q9BQ61 176 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 RABEP2Q9H5N1 569 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ARHGEF3Q9NR81 526 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 LNPEPQ9UIQ6 1025 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 RPL26L1Q9UNX3 145 aaKnown RBP10.18□□□□□ -0.78
RAB5B-206ENST00000549505 ANKRD6Q9Y2G4 727 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 SNX10Q9Y5X0 201 aa10.18□□□□□ -0.78
RAB5B-206ENST00000549505 COPEO14579 308 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 EPOP01588 193 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 IL10RBQ08334 325 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 FAM171A1Q5VUB5 890 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 PKN3Q6P5Z2 889 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 C14orf80Q86SX3 495 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 OR52K1Q8NGK4 314 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 MGARPQ8TDB4 240 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 DEPDC1BQ8WUY9 529 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 TBL1YQ9BQ87 522 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 VN1R3Q9BXE9 311 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 PRKD2Q9BZL6 878 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 UNC93B1Q9H1C4 597 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 HAO1Q9UJM8 370 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 SLC38A8A6NNN8 435 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 UGT1A9O60656 530 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 ITGA2BP08514 1039 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 DLDP09622 509 aaKnown RBP10.17□□□□□ -0.78
RAB5B-206ENST00000549505 OR4Q2P0C623 313 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 TUFMP49411 452 aaKnown RBP10.17□□□□□ -0.78
RAB5B-206ENST00000549505 PRKAA2P54646 552 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 CTC1Q2NKJ3 1217 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 RTP2Q5QGT7 225 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 RASIP1Q5U651 963 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 ZNF783Q6ZMS7 281 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 RNF19BQ6ZMZ0 732 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 CCDC91Q7Z6B0 441 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 LMNTD2Q8IXW0 634 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 FITM2Q8N6M3 262 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 RDH11Q8TC12 318 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 INPP5DQ92835 1189 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 PLD4Q96BZ4 506 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 GPR22Q99680 433 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 TUBB6Q9BUF5 446 aa10.17□□□□□ -0.78
RAB5B-206ENST00000549505 CRISPLD1Q9H336 500 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms