RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 YIPF2Q9BWQ6 316 aa9.4□□□□□ -0.9
PPFIA2-216ENST00000549396 NPHS2Q9NP85 383 aa9.4□□□□□ -0.9
PPFIA2-216ENST00000549396 PSME2Q9UL46 239 aa9.4□□□□□ -0.9
PPFIA2-216ENST00000549396 TIMM13Q9Y5L4 95 aaPredicted RBP9.4□□□□□ -0.9
PPFIA2-216ENST00000549396 TLL2Q9Y6L7 1015 aa9.4□□□□□ -0.9
PPFIA2-216ENST00000549396 CLTBP09497 229 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 RARAP10276 462 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 ORC1Q13415 861 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 TRIP4Q15650 581 aaPredicted RBP9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 ATP6AP1LQ52LC2 224 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 ATAD3BQ5T9A4 648 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 FUT10Q6P4F1 479 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 BHLHB9Q6PI77 547 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 ARCQ7LC44 396 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 PAGE2Q7Z2X7 111 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 SEC16BQ96JE7 1060 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 TRMOQ9BU70 441 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 SNRNP25Q9BV90 132 aaKnown RBP9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 FAIM2Q9BWQ8 316 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 ARHGAP39Q9C0H5 1083 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 TLE6Q9H808 572 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 ACTR8Q9H981 624 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 COQ4Q9Y3A0 265 aa9.4□□□□□ -0.91
PPFIA2-216ENST00000549396 TLR5O60602 858 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 CCNCP24863 283 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 ACLYP53396 1101 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 DGKZQ13574 1117 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 BRI3BPQ8WY22 251 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 SERAC1Q96JX3 654 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 SYNDIG1Q9H7V2 258 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 SAGE1Q9NXZ1 904 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 SNX6Q9UNH7 406 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 DTNAQ9Y4J8 743 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 hCG_1818297A0A087WSY0 165 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 KRT87PA6NCN2 255 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 GPR25O00155 361 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 BAIAP3O94812 1187 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 CCNB1P14635 433 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 LPOP22079 712 aaPredicted RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 L1CAMP32004 1257 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 PPARDQ03181 441 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 LRRC14Q15048 493 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 ARSHQ5FYA8 562 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 STXBP5Q5T5C0 1151 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 RASAL3Q86YV0 1011 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 CORO1BQ9BR76 489 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 DMAC2Q9NW81 257 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 USP54Q70EL1 1684 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 SNED1Q8TER0 1413 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 CACNB4O00305 520 aaPredicted RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 BIRC5O15392 142 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 TBL1XO60907 577 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 LTA4HP09960 611 aaKnown RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 MMP8P22894 467 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 TLX1P31314 330 aaPredicted RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 GAD2Q05329 585 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 IL17AQ16552 155 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 ZNF792Q3KQV3 632 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 PRAMEF19Q5SWL8 479 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 ELAC1Q9H777 363 aaKnown RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 DNAJC18Q9H819 358 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 PNPLA8Q9NP80 782 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 TAGLN3Q9UI15 199 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 RABGEF1Q9UJ41 708 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 TMCC3Q9ULS5 477 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 TMEM191CA6NGB0 347 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 FKBP6O75344 327 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 TRIM16O95361 564 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 RFC1P35251 1148 aaPredicted RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 IFNGR2P38484 337 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 CDH8P55286 799 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 CDCA2Q69YH5 1023 aaPredicted RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 NEPROQ6NW34 567 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 RBFAQ8N0V3 343 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 TDRD5Q8NAT2 981 aaKnown RBP9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 SPACA7Q96KW9 195 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 TLR10Q9BXR5 811 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 CDH19Q9H159 772 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 RPS6KB2Q9UBS0 482 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 INSL6Q9Y581 213 aa9.39□□□□□ -0.91
PPFIA2-216ENST00000549396 SLC28A1O00337 649 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 ENO1P06733 434 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 SOAT1P35610 550 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 SMAD3P84022 425 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 HSDL1Q3SXM5 330 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 EEF1DP3Q658K8 133 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 MPP5Q8N3R9 675 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 NOA1Q8NC60 698 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 LACRTQ9GZZ8 138 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 EIF2B3Q9NR50 452 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 PHTF1Q9UMS5 762 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 SLC27A6Q9Y2P4 619 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 BCLAF3A2AJT9 711 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 DNM1LO00429 736 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 SLC10A3P09131 477 aa9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 PABPC1P11940 636 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 CHI3L1P36222 383 aaPredicted RBP9.38□□□□□ -0.91
PPFIA2-216ENST00000549396 ARHGAP1Q07960 439 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms