RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SGSHP51688 502 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 GALCP54803 685 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 ECT2LQ008S8 904 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 LRRC63Q05C16 580 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 PNOCQ13519 176 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 CST6Q15828 149 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 ZSCAN23Q3MJ62 389 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 C3orf38Q5JPI3 329 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 ZNF658Q5TYW1 1059 aaPredicted RBP8.75□□□□□ -1.01
TROAP-208ENST00000548817 ANKRD40Q6AI12 368 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3GQ6DHY5 549 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3CQ6IPX1 549 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 PMF1Q6P1K2 205 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 NCEH1Q6PIU2 408 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 BHLHA9Q7RTU4 235 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 MMAAQ8IVH4 418 aaKnown RBP8.75□□□□□ -1.01
TROAP-208ENST00000548817 TBC1D3Q8IZP1 549 aaPredicted RBP8.75□□□□□ -1.01
TROAP-208ENST00000548817 PPM1KQ8N3J5 372 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 ZNF564Q8TBZ8 553 aaPredicted RBP8.75□□□□□ -1.01
TROAP-208ENST00000548817 EXTL1Q92935 676 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 SMARCE1Q969G3 411 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 FAM149B1Q96BN6 582 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 GSDMAQ96QA5 445 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 PPP1R9BQ96SB3 815 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 MIS12Q9H081 205 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 FZD4Q9ULV1 537 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 SATB2Q9UPW6 733 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 ERVW-1Q9UQF0 538 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
TROAP-208ENST00000548817 A0A1B0GVM2 712 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 PSMA7O14818 248 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 MID1O15344 667 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 EFSO43281 561 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 LUC7L3O95232 432 aaKnown RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 IL1BP01584 269 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 ITGA2BP08514 1039 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 GOT1P17174 413 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 BRD2P25440 801 aaKnown RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 SLC6A4P31645 630 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 CASRP41180 1078 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 ACADSBP45954 432 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 PSMD8P48556 350 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 FMO5P49326 533 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 OXCT1P55809 520 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 RPS24P62847 133 aaKnown RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 SULT2A1Q06520 285 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 FAM133BQ5BKY9 247 aaKnown RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 PITRM1Q5JRX3 1037 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 NAPEPLDQ6IQ20 393 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 DSG4Q86SJ6 1040 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 PRPF39Q86UA1 669 aaKnown RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 CHSY1Q86X52 802 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 ZC3H3Q8IXZ2 948 aaKnown RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 LGI2Q8N0V4 545 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 OR14C36Q8NHC7 312 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 WDR36Q8NI36 951 aaKnown RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 WFDC5Q8TCV5 224 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 SLC35F5Q8WV83 523 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 RNF34Q969K3 372 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 SLC35C1Q96A29 364 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 SERAC1Q96JX3 654 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 ABCG4Q9H172 646 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 EPN3Q9H201 632 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 NEUROG2Q9H2A3 272 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 GOLPH3LQ9H4A5 285 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 MTG2Q9H4K7 406 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 PLEKHB1Q9UF11 243 aaPredicted RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 ANAPC2Q9UJX6 822 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 ACSL6Q9UKU0 697 aa8.74□□□□□ -1.01
TROAP-208ENST00000548817 SETD2Q9BYW2 2564 aaPredicted RBP8.74□□□□□ -1.01
TROAP-208ENST00000548817 TTC34A8MYJ7 566 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 F5H5T6 163 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 P4HA2O15460 535 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 MED7O43513 233 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 LATO43561 262 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 IGLV3-27P01718 113 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 ALPPL2P10696 532 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 SLC2A3P11169 496 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 KRT5P13647 590 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 ZNF18P17022 549 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 C5AR1P21730 350 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 PPP1R2P41236 205 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 NNTQ13423 1086 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 SLC12A1Q13621 1099 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 MORC3Q14149 939 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 KCNJ12Q14500 433 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 ARID5BQ14865 1188 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 COBLL1Q53SF7 1204 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 DCAF6Q58WW2 860 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 MS4A13Q5J8X5 152 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 RABGAP1LQ5R372 815 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 C9orf64Q5T6V5 341 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 FAM46CQ5VWP2 391 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.73□□□□□ -1.01
TROAP-208ENST00000548817 SPATS2Q86XZ4 545 aaKnown RBP8.73□□□□□ -1.01
TROAP-208ENST00000548817 CFAP52Q8N1V2 620 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 STK40Q8N2I9 435 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 SLC25A45Q8N413 288 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 UBR7Q8N806 425 aa8.73□□□□□ -1.01
TROAP-208ENST00000548817 ATP6V0D2Q8N8Y2 350 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms