RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 FBXL22Q6P050 247 aa17.14■□□□□ 0.33
CPSF7-225ENST00000545934 SH2D3CQ8N5H7 860 aa17.14■□□□□ 0.33
CPSF7-225ENST00000545934 DHTKD1Q96HY7 919 aaPredicted RBP17.14■□□□□ 0.33
CPSF7-225ENST00000545934 HIC2Q96JB3 615 aa17.14■□□□□ 0.33
CPSF7-225ENST00000545934 GTPBP4Q9BZE4 634 aaKnown RBP17.14■□□□□ 0.33
CPSF7-225ENST00000545934 GDPD2Q9HCC8 539 aa17.14■□□□□ 0.33
CPSF7-225ENST00000545934 KLHL11Q9NVR0 708 aa17.14■□□□□ 0.33
CPSF7-225ENST00000545934 PCDHB1Q9Y5F3 818 aa17.14■□□□□ 0.33
CPSF7-225ENST00000545934 C1QTNF3-AMACRE9PGA6 284 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 DXOO77932 396 aaKnown RBP17.13■□□□□ 0.33
CPSF7-225ENST00000545934 CTSLP07711 333 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 SLC2A3P11169 496 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 CKMT1AP12532 417 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 CD44P16070 742 aaKnown RBP17.13■□□□□ 0.33
CPSF7-225ENST00000545934 IRAK1P51617 712 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 CCDC173Q0VFZ6 552 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 KCNMA1Q12791 1236 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 CETN1Q12798 172 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 DLG2Q15700 870 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 TTI2Q6NXR4 508 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 NEK5Q6P3R8 708 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 FOXR2Q6PJQ5 311 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 KDM7AQ6ZMT4 941 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 Q6ZVU0 165 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 ZNF606Q8WXB4 792 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 SLC2A13Q96QE2 648 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 MED15Q96RN5 788 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 UCKL1Q9NWZ5 548 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 SLC12A6Q9UHW9 1150 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 SLC25A13Q9UJS0 675 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 TBC1D30Q9Y2I9 924 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 ATP6V1DQ9Y5K8 247 aa17.13■□□□□ 0.33
CPSF7-225ENST00000545934 PSMA7O14818 248 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 LZTS3O60299 673 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-225ENST00000545934 SMC2O95347 1197 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 THEGLP0DJG4 465 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 CENPCQ03188 943 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 PDCLQ13371 301 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 AUHQ13825 339 aaKnown RBP17.12■□□□□ 0.33
CPSF7-225ENST00000545934 ZNF284Q2VY69 593 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 ACCSLQ4AC99 568 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 ZNF248Q8NDW4 579 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 SMARCE1Q969G3 411 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 ZNF578Q96N58 590 aaPredicted RBP17.12■□□□□ 0.33
CPSF7-225ENST00000545934 PPP1R9BQ96SB3 815 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 CAAP1Q9H8G2 361 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 HS3ST2Q9Y278 367 aa17.12■□□□□ 0.33
CPSF7-225ENST00000545934 KIF26BQ2KJY2 2108 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 COL6A6A6NMZ7 2263 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 LY6G6EA0A0G2JKS1 128 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 A0A1W2PQU0 124 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 ERVH48-1M5A8F1 160 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 MED7O43513 233 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 PIAS2O75928 621 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 GLI1P08151 1106 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 SRCP12931 536 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 CCR1P32246 355 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 MARSP56192 900 aaKnown RBP17.11■□□□□ 0.33
CPSF7-225ENST00000545934 CXADRP78310 365 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 DAB2P98082 770 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 CFHR1Q03591 330 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 KCNH2Q12809 1159 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 POM121L1PQ3SYA9 428 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 ZNF605Q86T29 641 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 DEFB106AQ8N104 65 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 WDTC1Q8N5D0 677 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 COL26A1Q96A83 441 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 WBP1Q96G27 269 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 RPRD1AQ96P16 312 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-225ENST00000545934 FAM204AQ9H8W3 233 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 ACP6Q9NPH0 428 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 GPR27Q9NS67 375 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 ASNSD1Q9NWL6 643 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 U3KQA8 63 aa17.11■□□□□ 0.33
CPSF7-225ENST00000545934 RNF103O00237 685 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 OPA1O60313 960 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 LETM1O95202 739 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-225ENST00000545934 GP1BAP07359 652 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 KRT5P13647 590 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 PRLRP16471 622 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 PCBP4P57723 403 aaKnown RBP17.1■□□□□ 0.33
CPSF7-225ENST00000545934 CDK17Q00537 523 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 GCNT7Q6ZNI0 430 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 ABI3BPQ7Z7G0 1075 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 HORMAD1Q86X24 394 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 SLC22A18ASQ8N1D0 253 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 FAM181AQ8N9Y4 354 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 TMIEQ8NEW7 156 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 OR13H1Q8NG92 308 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 OR2A12Q8NGT7 310 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 ARRDC3Q96B67 414 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 IFT43Q96FT9 208 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 PSMB7Q99436 277 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 LGMNQ99538 433 aa17.1■□□□□ 0.33
CPSF7-225ENST00000545934 INTS2Q9H0H0 1204 aaKnown RBP17.1■□□□□ 0.33
CPSF7-225ENST00000545934 DDIT4Q9NX09 232 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms