RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 NETO2Q8NC67 525 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 CCNYQ8ND76 341 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 ACTRT1Q8TDG2 376 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 COG1Q8WTW3 980 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 NSMCE1Q8WV22 266 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 EDAQ92838 391 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 TTC17Q96AE7 1141 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 HDAC11Q96DB2 347 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 ALG14Q96F25 216 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 ACE2Q9BYF1 805 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 BRD8Q9H0E9 1235 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 ELOVL2Q9NXB9 296 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 IPO11Q9UI26 975 aaKnown RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 VPS51Q9UID3 782 aa13.29□□□□□ -0.28
CDCA3-210ENST00000545368 INTS6Q9UL03 887 aaKnown RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 TTC7AQ9ULT0 858 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 NDRG2Q9UN36 371 aaKnown RBP13.29□□□□□ -0.28
CDCA3-210ENST00000545368 A0A0A0MRY4 1105 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 CXorf51AA0A1B0GTR3 108 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 KANSL1LA0AUZ9 987 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 PRRT4C9JH25 899 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 STK25O00506 426 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 ZNF185O15231 689 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 KDELR3O43731 214 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 ZNF500O60304 480 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-210ENST00000545368 SNAP91O60641 907 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 ZNF189O75820 626 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-210ENST00000545368 EGFP01133 1207 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 DLDP09622 509 aaKnown RBP13.28□□□□□ -0.28
CDCA3-210ENST00000545368 CD72P21854 359 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 NNMTP40261 264 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 ST8SIA6P61647 398 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 ECT2LQ008S8 904 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 IL10RBQ08334 325 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 MESP2Q0VG99 397 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 SLC10A2Q12908 348 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-210ENST00000545368 LRRC32Q14392 662 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 UBXN2BQ14CS0 331 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 NOMO1Q15155 1222 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 MS4A14Q96JA4 679 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 CAPZA3Q96KX2 299 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 OLFM3Q96PB7 478 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 NELL2Q99435 816 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 FRMD8P1Q9BZ68 369 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-210ENST00000545368 MFSD1Q9H3U5 465 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 TBC1D17Q9HA65 648 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 FBRSL1Q9HCM7 1045 aaKnown RBP13.28□□□□□ -0.28
CDCA3-210ENST00000545368 LTB4R2Q9NPC1 389 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 SAE1Q9UBE0 346 aaPredicted RBP13.28□□□□□ -0.28
CDCA3-210ENST00000545368 RNF14Q9UBS8 474 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 PLA2G4CQ9UP65 541 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 SLC8A2Q9UPR5 921 aa13.28□□□□□ -0.28
CDCA3-210ENST00000545368 SHROOM3Q8TF72 1996 aa13.27□□□□□ -0.28
CDCA3-210ENST00000545368 UNC80Q8N2C7 3258 aa13.27□□□□□ -0.28
CDCA3-210ENST00000545368 F5P12259 2224 aa13.27□□□□□ -0.28
CDCA3-210ENST00000545368 TCRBV7S2A1N4TA0A589 114 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 SHISA7A6NL88 538 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 HACD1B0YJ81 288 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 H7C0C1 242 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 NPC1O15118 1278 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 PRAMEF11O60813 436 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 SRPRAP08240 638 aaKnown RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 GLDCP23378 1020 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 ATP5OP48047 213 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 SEC13P55735 322 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 EIF3EP60228 445 aaKnown RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 ARF5P84085 180 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 ZNF33AQ06730 810 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 SLC20A2Q08357 652 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 AP1B1Q10567 949 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 XRCC4Q13426 336 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 FNDC3BQ53EP0 1204 aaKnown RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 DGKKQ5KSL6 1271 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 DNTTIP2Q5QJE6 756 aaKnown RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 TMEM215Q68D42 235 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 ARHGAP36Q6ZRI8 547 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 TRMT11Q7Z4G4 463 aaKnown RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 METTL3Q86U44 580 aaKnown RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 ZC3H18Q86VM9 953 aaKnown RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 CDKL3Q8IVW4 592 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 TP53INP2Q8IXH6 220 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 CCDC13Q8IYE1 715 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 BBS5Q8N3I7 341 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 ZNF513Q8N8E2 541 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 TFB1MQ8WVM0 346 aaKnown RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 CASKIN2Q8WXE0 1202 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 QKIQ96PU8 341 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 HOMER3Q9NSC5 361 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 HAUS2Q9NVX0 235 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 UBA2Q9UBT2 640 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-210ENST00000545368 ERVW-1Q9UQF0 538 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 STARD13Q9Y3M8 1113 aa13.27□□□□□ -0.29
CDCA3-210ENST00000545368 MUC22E2RYF6 1773 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-210ENST00000545368 K7EQS6 105 aa13.26□□□□□ -0.29
CDCA3-210ENST00000545368 KRIT1O00522 736 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms