RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 IRX4P78413 519 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 TRIM14Q14142 442 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 ACCSLQ4AC99 568 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 ALFQ53S48 1182 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 TCEAL6Q6IPX3 200 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 TFAP2DQ7Z6R9 452 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 PHLDB2Q86SQ0 1253 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 SH2D3CQ8N5H7 860 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 FNIP1Q8TF40 1166 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 PTPRN2Q92932 1015 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 TCEAL3Q969E4 200 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 TBC1D31Q96DN5 1066 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 EPAS1Q99814 870 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 OMDQ99983 421 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 SMOC1Q9H4F8 434 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 MRPL47Q9HD33 250 aaKnown RBP12.11□□□□□ -0.47
HDAC4-216ENST00000544989 ANLNQ9NQW6 1124 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 FBXL12Q9NXK8 326 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 ADAMTS1Q9UHI8 967 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 HPCAL4Q9UM19 191 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 CAPN11Q9UMQ6 739 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 LUC7L2Q9Y383 392 aaKnown RBP12.11□□□□□ -0.47
HDAC4-216ENST00000544989 PI4KAP42356 2102 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 FAM170AA1A519 330 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 I6L893 689 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 SLC7A4O43246 635 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 FTLP02792 175 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 SERPING1P05155 500 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 TPM1P09493 284 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 GOT1P17174 413 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 RRM1P23921 792 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 L1CAMP32004 1257 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 SLC8A1P32418 973 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 RECQLP46063 649 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 STK19P49842 368 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 IRAK1P51617 712 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 ZNF135P52742 658 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 MAMLD1Q13495 774 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 ACAP1Q15027 740 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 DLG2Q15700 870 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 TDRD12Q587J7 1177 aaKnown RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 MANEALQ5VSG8 457 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 DCAF12L1Q5VU92 463 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 RWDD4Q6NW29 188 aaKnown RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 IL27RAQ6UWB1 636 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 ZNF571Q7Z3V5 609 aaPredicted RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 FAM124AQ86V42 546 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 CACUL1Q86Y37 369 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 MMAAQ8IVH4 418 aaKnown RBP12.1□□□□□ -0.47
HDAC4-216ENST00000544989 STK40Q8N2I9 435 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 DEFB119Q8N690 84 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 ATP11CQ8NB49 1132 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 FRS2Q8WU20 508 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 CEP44Q9C0F1 390 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 MAGEH1Q9H213 219 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 TSPY26PQ9H489 355 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 CATSPERBQ9H7T0 1116 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 CAPN10Q9HC96 672 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 OSGEPQ9NPF4 335 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 TMEM74BQ9NUR3 256 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 TMEM248Q9NWD8 314 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 MPP6Q9NZW5 540 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 VPS51Q9UID3 782 aa12.1□□□□□ -0.47
HDAC4-216ENST00000544989 LAMA1P25391 3075 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 ZSCAN5CA6NGD5 496 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-216ENST00000544989 C4orf47A7E2U8 309 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 TMCO5BA8MYB1 307 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 PATE3B3GLJ2 98 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 ARHGAP33O14559 1287 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 MCF2LO15068 1137 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 MID1O15344 667 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 BCAT2O15382 392 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-216ENST00000544989 FGF10O15520 208 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-216ENST00000544989 CCP110O43303 1012 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 RNASEH2AO75792 299 aaKnown RBP12.09□□□□□ -0.47
HDAC4-216ENST00000544989 RNF8O76064 485 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 IL1BP01584 269 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 ENGP17813 658 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 PSMA2P25787 234 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 NUDT1P36639 197 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 PSMD8P48556 350 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 RPL7AP62424 266 aaKnown RBP12.09□□□□□ -0.47
HDAC4-216ENST00000544989 GNA12Q03113 381 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 TEAD4Q15561 434 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 SH3PXD2AQ5TCZ1 1133 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 SCYL2Q6P3W7 929 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 PSTKQ8IV42 348 aaKnown RBP12.09□□□□□ -0.47
HDAC4-216ENST00000544989 DRC7Q8IY82 874 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 HDDC3Q8N4P3 179 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 OR2T34Q8NGX1 318 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 SKA1Q96BD8 255 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 FAM129BQ96TA1 746 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 ISCUQ9H1K1 167 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 ATP13A1Q9HD20 1204 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 CD93Q9NPY3 652 aa12.09□□□□□ -0.47
HDAC4-216ENST00000544989 TAS2R14Q9NYV8 317 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms