RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ATP6V1G2O95670 118 aa13□□□□□ -0.33
CHD4-211ENST00000544484 CCDC166P0CW27 439 aa13□□□□□ -0.33
CHD4-211ENST00000544484 AMPD2Q01433 879 aa13□□□□□ -0.33
CHD4-211ENST00000544484 TRMT5Q32P41 509 aaKnown RBP13□□□□□ -0.33
CHD4-211ENST00000544484 PCID2Q5JVF3 399 aa13□□□□□ -0.33
CHD4-211ENST00000544484 VN1R5Q7Z5H4 357 aa13□□□□□ -0.33
CHD4-211ENST00000544484 GPR141Q7Z602 305 aa13□□□□□ -0.33
CHD4-211ENST00000544484 JOSD2Q8TAC2 188 aa13□□□□□ -0.33
CHD4-211ENST00000544484 UTP15Q8TED0 518 aaKnown RBP13□□□□□ -0.33
CHD4-211ENST00000544484 RSPH1Q8WYR4 309 aa13□□□□□ -0.33
CHD4-211ENST00000544484 ZNF558Q96NG5 402 aa13□□□□□ -0.33
CHD4-211ENST00000544484 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13□□□□□ -0.33
CHD4-211ENST00000544484 VTI1BQ9UEU0 232 aa13□□□□□ -0.33
CHD4-211ENST00000544484 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
CHD4-211ENST00000544484 PROCP04070 461 aa13□□□□□ -0.33
CHD4-211ENST00000544484 HSMCR30P0CW71 290 aa13□□□□□ -0.33
CHD4-211ENST00000544484 ERCC2P18074 760 aa13□□□□□ -0.33
CHD4-211ENST00000544484 KPNB1Q14974 876 aaKnown RBP13□□□□□ -0.33
CHD4-211ENST00000544484 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
CHD4-211ENST00000544484 TRIM69Q86WT6 500 aa13□□□□□ -0.33
CHD4-211ENST00000544484 PHF13Q86YI8 300 aaPredicted RBP13□□□□□ -0.33
CHD4-211ENST00000544484 TNFRSF25Q93038 417 aa13□□□□□ -0.33
CHD4-211ENST00000544484 TPD52L3Q96J77 140 aa13□□□□□ -0.33
CHD4-211ENST00000544484 ANKRD6Q9Y2G4 727 aa13□□□□□ -0.33
CHD4-211ENST00000544484 FGF10O15520 208 aaPredicted RBP12.99□□□□□ -0.33
CHD4-211ENST00000544484 TSPAN8P19075 237 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 PKNOX1P55347 436 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 INHBEP58166 350 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 MRPL28Q13084 256 aaKnown RBP12.99□□□□□ -0.33
CHD4-211ENST00000544484 LRRC39Q96DD0 335 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 NCANO14594 1321 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 AVILO75366 819 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 ATP4AP20648 1035 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 RGMBQ6NW40 437 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 BNIPLQ7Z465 357 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 CERS2Q96G23 380 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 SEMA3CQ99985 751 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 TBCDQ9BTW9 1192 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 C2orf49Q9BVC5 232 aaPredicted RBP12.99□□□□□ -0.33
CHD4-211ENST00000544484 ZCCHC2Q9C0B9 1178 aaKnown RBP12.99□□□□□ -0.33
CHD4-211ENST00000544484 ASB8Q9H765 288 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 COMMD8Q9NX08 183 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 LIMD1Q9UGP4 676 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 ZBTB14O43829 449 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 FKBP6O75344 327 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 CABYRO75952 493 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 CRYBB1P53674 252 aaPredicted RBP12.99□□□□□ -0.33
CHD4-211ENST00000544484 IL2P60568 153 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 PABPC1LQ4VXU2 614 aaKnown RBP12.99□□□□□ -0.33
CHD4-211ENST00000544484 PIK3R5Q8WYR1 880 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 PANX3Q96QZ0 392 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 OMDQ99983 421 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 TMEM79Q9BSE2 394 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 BTBD7Q9P203 1132 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 OPTCQ9UBM4 332 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 PCYOX1Q9UHG3 505 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 ZMYM2Q9UBW7 1377 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 hCG_1818297A0A087WSY0 165 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 KRT8P05787 483 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 IL5RAQ01344 420 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 AUHQ13825 339 aaKnown RBP12.99□□□□□ -0.33
CHD4-211ENST00000544484 LRRC38Q5VT99 294 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 SCARA3Q6AZY7 606 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 SPATA6LQ8N4H0 392 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 MTA1Q13330 715 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 ISLR2Q6UXK2 745 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 ABHD15Q6UXT9 468 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 DHFR2Q86XF0 187 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 GLMNQ92990 594 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 VPS33AQ96AX1 596 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 RNF145Q96MT1 663 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 KREMEN1Q96MU8 473 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 PDP2Q9P2J9 529 aa12.99□□□□□ -0.33
CHD4-211ENST00000544484 TBL1XO60907 577 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 FGRP09769 529 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 CYP2A6P11509 494 aaPredicted RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 TNNI3P19429 210 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 FASP25445 335 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 KYAT3Q6YP21 454 aaKnown RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 PCDH20Q8N6Y1 951 aaKnown RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 SUSD6Q92537 303 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 ALG3Q92685 438 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 MLPHQ9BV36 600 aaPredicted RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 FAM105AQ9NUU6 356 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 MPP6Q9NZW5 540 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 KLQ9UEF7 1012 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 FAM237BA0A1B0GVD1 139 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 ATP5BP06576 529 aaKnown RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 POLR2LP62875 67 aaKnown RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 IRX1P78414 480 aaPredicted RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 CDK16Q00536 496 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 PFKPQ01813 784 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 CYP4Z1Q86W10 505 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 INPP4AQ96PE3 977 aaPredicted RBP12.98□□□□□ -0.33
CHD4-211ENST00000544484 ZYG11BQ9C0D3 744 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 BMT2Q1RMZ1 405 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 ZNF621Q6ZSS3 439 aa12.98□□□□□ -0.33
CHD4-211ENST00000544484 USP45Q70EL2 814 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms