RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SETD4Q9NVD3 440 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF358Q9NW07 568 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 TRHDEQ9UKU6 1024 aa13.99□□□□□ -0.17
VPS33A-208ENST00000543633 MYO18AQ92614 2054 aaKnown RBP13.99□□□□□ -0.17
VPS33A-208ENST00000543633 PRSS51A0A1B0GVH4 220 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 ASB14A6NK59 587 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 CREB3O43889 395 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 HCAR3P49019 387 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 IGBP1P78318 339 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 ARHGAP1Q07960 439 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PPIDQ08752 370 aaKnown RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 SCAPQ12770 1279 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 KCTD2Q14681 263 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 OTUD1Q5VV17 481 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 BSPRYQ5W0U4 402 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 LIMS2Q7Z4I7 341 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 FAM131BQ86XD5 332 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 CCNYQ8ND76 341 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 OR52K1Q8NGK4 314 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PDCD6IPQ8WUM4 868 aaKnown RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 NLRP7Q8WX94 980 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 COPS5Q92905 334 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 GCNAQ96QF7 691 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 VAT1Q99536 393 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 EPAS1Q99814 870 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 ACE2Q9BYF1 805 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 GBA3Q9H227 469 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 GDAP2Q9NXN4 497 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 KLHL8Q9P2G9 620 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 A0A0G2JLL6 359 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PSMD3O43242 534 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 BCAS2O75934 225 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 CRTAMO95727 393 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 CLPTM1O96005 669 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 CD4P01730 458 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 CYP2B6P20813 491 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PTPN3P26045 913 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PMLP29590 882 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PNPLA4P41247 253 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 THOP1P52888 689 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 NSUN2Q08J23 767 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PCBP1Q15365 356 aaKnown RBP eCLIP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 C9orf57Q5W0N0 161 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 MOB2Q70IA6 237 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PID1Q7Z2X4 250 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 PRRT2Q7Z6L0 340 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 SATL1Q86VE3 508 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 KCNMB4Q86W47 210 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 KLHDC8BQ8IXV7 354 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 TNS4Q8IZW8 715 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 DEFB106AQ8N104 65 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 HIPK4Q8NE63 616 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 KBTBD7Q8WVZ9 684 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 TOP1MTQ969P6 601 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 VPS39Q96JC1 886 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 TNIP3Q96KP6 325 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 SLC2A13Q96QE2 648 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 OXCT2Q9BYC2 517 aaPredicted RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 MAGEB5Q9BZ81 275 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 DPEP3Q9H4B8 488 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 MRM3Q9HC36 420 aaKnown RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 SEPT10Q9P0V9 454 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 THEGQ9P2T0 379 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 UBQLN1Q9UMX0 589 aaKnown RBP13.98□□□□□ -0.17
VPS33A-208ENST00000543633 DMTF1Q9Y222 760 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 CDYLQ9Y232 598 aa13.98□□□□□ -0.17
VPS33A-208ENST00000543633 ZNF638Q14966 1978 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 EEF2KO00418 725 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PEX10O60683 326 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 TMCC1O94876 653 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 VTNP04004 478 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 ME2P23368 584 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 ADORA2BP29275 332 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 SERPINB5P36952 375 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 IREB2P48200 963 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PSMD8P48556 350 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PEX6Q13608 980 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 APOFQ13790 326 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 LSM12Q3MHD2 195 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 PABPC1LQ4VXU2 614 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 LRRC23Q53EV4 343 aaPredicted RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 SLC27A1Q6PCB7 646 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 B3GNT6Q6ZMB0 384 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 EGFL6Q8IUX8 553 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 STYXQ8WUJ0 223 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 KCTD13Q8WZ19 329 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 EZH1Q92800 747 aaPredicted RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 EMID1Q96A84 441 aaPredicted RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 HDAC11Q96DB2 347 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 C1QTNF1Q9BXJ1 281 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 RBM38Q9H0Z9 239 aaKnown RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 RHOJQ9H4E5 214 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 SUDS3Q9H7L9 328 aaPredicted RBP13.97□□□□□ -0.17
VPS33A-208ENST00000543633 EFCAB1Q9HAE3 211 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 ZBTB26Q9HCK0 441 aa13.97□□□□□ -0.17
VPS33A-208ENST00000543633 MAN1C1Q9NR34 630 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms