RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 TMTC1Q8IUR5 882 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 CNGA4Q8IV77 575 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 VPS37AQ8NEZ2 397 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 LINS1Q8NG48 757 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 MRPS27Q92552 414 aaKnown RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 TAF4BQ92750 862 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 CASP10Q92851 521 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SKA1Q96BD8 255 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 HAUS1Q96CS2 278 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SNF8Q96H20 258 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 CCT7Q99832 543 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SLC39A3Q9BRY0 314 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 CCDC68Q9H2F9 335 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 HAUS4Q9H6D7 363 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 BRD9Q9H8M2 597 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 PTTG2Q9NZH5 202 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SEPT10Q9P0V9 454 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ZMAT5Q9UDW3 170 aaKnown RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 FBXO9Q9UK97 447 aaPredicted RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 PRELID1Q9Y255 219 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ENTPD2Q9Y5L3 495 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 COL4A3BPQ9Y5P4 624 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 IKBKGQ9Y6K9 419 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ITIH6Q6UXX5 1313 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 PALLDQ8WX93 1383 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 ARHGAP23Q9P227 1491 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 RGPD8O14715 1765 aaPredicted RBP6.13□□□□□ -1.43
XRCC4-206ENST00000542685 SCN11AQ9UI33 1791 aa6.13□□□□□ -1.43
XRCC4-206ENST00000542685 FAM237AA0A1B0GTK4 181 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 A0A1B0GVG6 124 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 TRIM43BA6NCK2 446 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 ALG1L2C9J202 215 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 GOLGA8TH3BQL2 631 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 CETN3O15182 167 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 GJB1P08034 283 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 ITGA2BP08514 1039 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 ELFN1P0C7U0 828 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 GOLGA8HP0CJ92 632 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 HSPA8P11142 646 aaKnown RBP6.12□□□□□ -1.43
XRCC4-206ENST00000542685 PRLRP16471 622 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 GNAZP19086 355 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 GPD1P21695 349 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 CCNCP24863 283 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 RGS2P41220 211 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 PHKA1P46020 1223 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 NEDD4P46934 1319 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 AFDNP55196 1824 aaKnown RBP6.12□□□□□ -1.43
XRCC4-206ENST00000542685 RPL26P61254 145 aaKnown RBP6.12□□□□□ -1.43
XRCC4-206ENST00000542685 CTAG1AP78358 180 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 HPCAP84074 193 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 ITGA7Q13683 1181 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 CYLC2Q14093 348 aaPredicted RBP6.12□□□□□ -1.43
XRCC4-206ENST00000542685 PTPRRQ15256 657 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 TXNRD1Q16881 649 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 PDS5AQ29RF7 1337 aaKnown RBP6.12□□□□□ -1.43
XRCC4-206ENST00000542685 PARP6Q2NL67 630 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 ZNF569Q5MCW4 686 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 TMPRSS9Q7Z410 1059 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 UBE2Q1Q7Z7E8 422 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 MYO1HQ8N1T3 1032 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 MIER2Q8N344 545 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 TC2NQ8N9U0 490 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 NOA1Q8NC60 698 aaKnown RBP6.12□□□□□ -1.43
XRCC4-206ENST00000542685 MORC4Q8TE76 937 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 SCAMP4Q969E2 229 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 EFHD2Q96C19 240 aaPredicted RBP6.12□□□□□ -1.43
XRCC4-206ENST00000542685 VPS50Q96JG6 964 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 SPATA16Q9BXB7 569 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 RAB17Q9H0T7 212 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 CCDC134Q9H6E4 229 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 RNPEPL1Q9HAU8 725 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 PCDH12Q9NPG4 1184 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 FAIMQ9NVQ4 179 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 RNF14Q9UBS8 474 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 SEL1LQ9UBV2 794 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 MYH13Q9UKX3 1938 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 ST3GAL5Q9UNP4 418 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 SAR1BQ9Y6B6 198 aa6.12□□□□□ -1.43
XRCC4-206ENST00000542685 ARFGEF2Q9Y6D5 1785 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 TMEM2Q9UHN6 1383 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 ACEP12821 1306 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 WDR19Q8NEZ3 1342 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 A0A0J9YVX5 310 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 KANSL1LA0AUZ9 987 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 LINC00473A8K010 186 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 VWC2LB2RUY7 222 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 NT5C1B-RDH14C9J2C7 533 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 E7ENX8 843 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 F5H697 171 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 HNRNPCL1O60812 293 aaKnown RBP6.11□□□□□ -1.43
XRCC4-206ENST00000542685 PROP1O75360 226 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 TACC1O75410 805 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 MAP4K4O95819 1239 aaPredicted RBP6.11□□□□□ -1.43
XRCC4-206ENST00000542685 ZFYP08048 801 aaPredicted RBP6.11□□□□□ -1.43
XRCC4-206ENST00000542685 CDK4P11802 303 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 PEX5P50542 639 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 ZNF132P52740 706 aa6.11□□□□□ -1.43
XRCC4-206ENST00000542685 ZNF135P52742 658 aaPredicted RBP6.11□□□□□ -1.43
XRCC4-206ENST00000542685 TAP2Q03519 686 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms