RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 WARSP23381 471 aaKnown RBP10.34□□□□□ -0.75
TOP3A-208ENST00000542570 CTGFP29279 349 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 FMO4P31512 558 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 PPM1JQ5JR12 505 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 UBAP2Q5T6F2 1119 aaKnown RBP10.34□□□□□ -0.75
TOP3A-208ENST00000542570 ZNF567Q8N184 647 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 SH3KBP1Q96B97 665 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 BBS2Q9BXC9 721 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 SLC4A5Q9BY07 1137 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 NFKBIZQ9BYH8 718 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 FOXP3Q9BZS1 431 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 ZDHHC4Q9NPG8 344 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 SENP1Q9P0U3 644 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 DRG1Q9Y295 367 aaKnown RBP10.34□□□□□ -0.75
TOP3A-208ENST00000542570 Q9Y3F1 56 aa10.34□□□□□ -0.75
TOP3A-208ENST00000542570 SCAMP1O15126 338 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 EOMESO95936 686 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 MAP2K2P36507 400 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 KPNA2P52292 529 aaKnown RBP10.33□□□□□ -0.76
TOP3A-208ENST00000542570 PARP6Q2NL67 630 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 SPDYAQ5MJ70 313 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 GPR158Q5T848 1215 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 TIGD7Q6NT04 549 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-208ENST00000542570 DET1Q7L5Y6 550 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ITIH5Q86UX2 942 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ZDHHC14Q8IZN3 488 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 CYP4X1Q8N118 509 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 MPP5Q8N3R9 675 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 TDRD5Q8NAT2 981 aaKnown RBP10.33□□□□□ -0.76
TOP3A-208ENST00000542570 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 KBTBD7Q8WVZ9 684 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 RUBCNQ92622 972 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ADA2Q9NZK5 511 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 CIDEBQ9UHD4 219 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 CPQQ9Y646 472 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ECM29Q5VYK3 1845 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 E9PBE3 544 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 NEDD8-MDP1E9PL57 170 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 NVLO15381 856 aaKnown RBP10.33□□□□□ -0.76
TOP3A-208ENST00000542570 KLHL41O60662 606 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 STMN1P16949 149 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 TPD52P55327 224 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-208ENST00000542570 UPP1Q16831 310 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 RHBDF2Q6PJF5 856 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 MARK2Q7KZI7 788 aaKnown RBP10.33□□□□□ -0.76
TOP3A-208ENST00000542570 RD3Q7Z3Z2 195 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ARHGAP24Q8N264 748 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 HDAC10Q969S8 669 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 EMILIN2Q9BXX0 1053 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 PMM2O15305 246 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 CNTN5O94779 1100 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ADH1AP07327 375 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 CLTBP09497 229 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 PROZP22891 400 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 PPARGP37231 505 aaPredicted RBP10.33□□□□□ -0.76
TOP3A-208ENST00000542570 UGP2Q16851 508 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 RTP2Q5QGT7 225 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 RETSATQ6NUM9 610 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 NEPROQ6NW34 567 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ARHGAP36Q6ZRI8 547 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ADCK2Q7Z695 626 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 TBL1YQ9BQ87 522 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 SLC28A3Q9HAS3 691 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 IRAK4Q9NWZ3 460 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 RRN3Q9NYV6 651 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 SLC17A7Q9P2U7 560 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 HAO1Q9UJM8 370 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 DNAJC16Q9Y2G8 782 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ARL2BPQ9Y2Y0 163 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 ACOT9Q9Y305 439 aa10.33□□□□□ -0.76
TOP3A-208ENST00000542570 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.33□□□□□ -0.76
TOP3A-208ENST00000542570 C2orf71A6NGG8 1288 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 OR6C75A6NL08 312 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 NCAM2O15394 837 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 MEFVO15553 781 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-208ENST00000542570 LZTS3O60299 673 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-208ENST00000542570 GLUD1P00367 558 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 C8AP07357 584 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 ENO3P13929 434 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-208ENST00000542570 CUL3Q13618 768 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 LBRQ14739 615 aaKnown RBP10.32□□□□□ -0.76
TOP3A-208ENST00000542570 ARHGAP17Q68EM7 881 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 ZDHHC24Q6UX98 284 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 GLT6D1Q7Z4J2 308 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 DNAJB7Q7Z6W7 309 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-208ENST00000542570 TTC7BQ86TV6 843 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 MTDHQ86UE4 582 aaKnown RBP10.32□□□□□ -0.76
TOP3A-208ENST00000542570 FNIP1Q8TF40 1166 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 PACSIN3Q9UKS6 424 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 PCNTO95613 3336 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 GLP2RO95838 553 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 GALTP07902 379 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 TM4SF4P48230 202 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 SERPINB9P50453 376 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 AQP5P55064 265 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 TRPM8Q7Z2W7 1104 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 POU5F2Q8N7G0 328 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 C12orf76Q8N812 135 aaPredicted RBP10.32□□□□□ -0.76
TOP3A-208ENST00000542570 SLC22A17Q8WUG5 538 aa10.32□□□□□ -0.76
TOP3A-208ENST00000542570 HMCESQ96FZ2 354 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms