RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MCF2LO15068 1137 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 PLRG1O43660 514 aaKnown RBP16.04■□□□□ 0.16
VPS33A-206ENST00000542310 MMEP08473 750 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 FLT3P36888 993 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 RNASE9P60153 205 aaKnown RBP16.04■□□□□ 0.16
VPS33A-206ENST00000542310 KRT31Q15323 416 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 DLG2Q15700 870 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 SLC45A4Q5BKX6 768 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 C6orf118Q5T5N4 469 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 LAYNQ6UX15 382 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 ZNF783Q6ZMS7 281 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 TRIM72Q6ZMU5 477 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 TRIM69Q86WT6 500 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 CHCHD4Q8N4Q1 142 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 OR14C36Q8NHC7 312 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 ZCCHC14Q8WYQ9 949 aaKnown RBP16.04■□□□□ 0.16
VPS33A-206ENST00000542310 GBP4Q96PP9 640 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 PSMB7Q99436 277 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 PPM1HQ9ULR3 514 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 A0A1B0GTQ1 180 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 A0A1W2PR77 199 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 E9PAM4 449 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 H0Y8X5 98 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 CNTN5O94779 1100 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 CYP1A1P04798 512 aaPredicted RBP16.03■□□□□ 0.16
VPS33A-206ENST00000542310 CD38P28907 300 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 GSCP56915 257 aaPredicted RBP16.03■□□□□ 0.16
VPS33A-206ENST00000542310 JAM2P57087 298 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 CDR2Q01850 454 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 ACCSLQ4AC99 568 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 ALFQ53S48 1182 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 AGBL4Q5VU57 503 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 NAA35Q5VZE5 725 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 NAPEPLDQ6IQ20 393 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 TRNP1Q6NT89 227 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 Q6ZVU0 165 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 OXR1Q8N573 874 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 PIP4K2CQ8TBX8 421 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 RHBDD1Q8TEB9 315 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 ELF4Q99607 663 aaPredicted RBP16.03■□□□□ 0.16
VPS33A-206ENST00000542310 EBF2Q9HAK2 575 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 PREBQ9HCU5 417 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 TOR4AQ9NXH8 423 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 VPS51Q9UID3 782 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 DMTF1Q9Y222 760 aa16.03■□□□□ 0.16
VPS33A-206ENST00000542310 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
VPS33A-206ENST00000542310 CXorf51AA0A1B0GTR3 108 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 GOLGA8SH3BPF8 625 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 ENDOD1O94919 500 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 SRCP12931 536 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 MMP8P22894 467 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 SOX5P35711 763 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 PPP2CBP62714 309 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 PPP2CAP67775 309 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 FMO1Q01740 532 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 NRG1Q02297 640 aaPredicted RBP16.02■□□□□ 0.16
VPS33A-206ENST00000542310 OVGP1Q12889 678 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 KCNT1Q5JUK3 1230 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 IQCHQ86VS3 1027 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 ANKRD20A12PQ8NF67 263 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 CPA5Q8WXQ8 436 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 SERAC1Q96JX3 654 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 CFAP57Q96MR6 1250 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 RETREG1Q9H6L5 497 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 GDF3Q9NR23 364 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 AASDHPPTQ9NRN7 309 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 METTL5Q9NRN9 209 aaKnown RBP16.02■□□□□ 0.16
VPS33A-206ENST00000542310 PPARGC1AQ9UBK2 798 aaKnown RBP16.02■□□□□ 0.16
VPS33A-206ENST00000542310 ZNF212Q9UDV6 495 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 SARDHQ9UL12 918 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 BTBD3Q9Y2F9 522 aa16.02■□□□□ 0.16
VPS33A-206ENST00000542310 DOCK9Q9BZ29 2069 aa16.02■□□□□ 0.15
VPS33A-206ENST00000542310 FREM2Q5SZK8 3169 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3DA0A087WVF3 549 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3IA0A087WXS9 549 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3EA0A087X179 549 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3KA0A087X1G2 549 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 ILVBLA1L0T0 632 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3FA6NER0 549 aaPredicted RBP16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TNFSF14O43557 240 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 MAGEC1O60732 1142 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 GFPT2O94808 682 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 WNT1P04628 370 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3HP0C7X1 549 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 OR1E1P30953 314 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 NUMBP49757 651 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 METAP1P53582 386 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 POLR2FP61218 127 aaKnown RBP16.01■□□□□ 0.15
VPS33A-206ENST00000542310 CCDC15Q0P6D6 951 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 ARTNQ5T4W7 220 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3GQ6DHY5 549 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3CQ6IPX1 549 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 C22orf39Q6P5X5 142 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.01■□□□□ 0.15
VPS33A-206ENST00000542310 PRPF39Q86UA1 669 aaKnown RBP16.01■□□□□ 0.15
VPS33A-206ENST00000542310 SLCO6A1Q86UG4 719 aa16.01■□□□□ 0.15
VPS33A-206ENST00000542310 TBC1D3Q8IZP1 549 aaPredicted RBP16.01■□□□□ 0.15
VPS33A-206ENST00000542310 ATP11CQ8NB49 1132 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms