RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 GRK6P43250 576 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 RPS6KA3P51812 740 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 C5orf22Q49AR2 442 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 PARM1Q6UWI2 310 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 SLC16A12Q6ZSM3 486 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 MOGAT3Q86VF5 341 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 FAM185AQ8N0U4 392 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 KDM1BQ8NB78 822 aa6.57□□□□□ -1.36
YBX3-210ENST00000540975 CMASQ8NFW8 434 aaPredicted RBP6.57□□□□□ -1.36
YBX3-210ENST00000540975 ACTR5Q9H9F9 607 aaPredicted RBP6.57□□□□□ -1.36
YBX3-210ENST00000540975 CYP4B1P13584 511 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 ARSAP15289 507 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 PNPLA4P41247 253 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 MCM2P49736 904 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 GXYLT1Q4G148 440 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 LVRNQ6Q4G3 990 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 GALNT7Q86SF2 657 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 FAM217AQ8IXS0 508 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 ASB5Q8WWX0 329 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 THAP4Q8WY91 577 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 MYLK2Q9H1R3 596 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 ZDHHC7Q9NXF8 308 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 SLC4A4Q9Y6R1 1079 aa6.56□□□□□ -1.36
YBX3-210ENST00000540975 B9A039 149 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 SYN3O14994 580 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 TCEA3O75764 348 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 TNFSF8P32971 234 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 RASSF2P50749 326 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 PGGT1BP53609 377 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 RAPGEF1Q13905 1077 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 ZNF484Q5JVG2 852 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 AFG1LQ8WV93 481 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 CCT6BQ92526 530 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 TBC1D20Q96BZ9 403 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 CADM1Q9BY67 442 aaKnown RBP6.55□□□□□ -1.36
YBX3-210ENST00000540975 B3GNT4Q9C0J1 378 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 ACAD9Q9H845 621 aa6.55□□□□□ -1.36
YBX3-210ENST00000540975 MST1RQ04912 1400 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 RPS10-NUDT3A0A1W2PQS6 291 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 TMEM247A6NEH6 219 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 TNFRSF13BO14836 293 aaPredicted RBP6.54□□□□□ -1.36
YBX3-210ENST00000540975 SPTLC2O15270 562 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 CCNT1O60563 726 aaKnown RBP6.54□□□□□ -1.36
YBX3-210ENST00000540975 CSF1P09603 554 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 ITGB6P18564 788 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 MVDP53602 400 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 THOC5Q13769 683 aaKnown RBP6.54□□□□□ -1.36
YBX3-210ENST00000540975 PKP1Q13835 747 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 ANO1Q5XXA6 986 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 AADACL2Q6P093 401 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 CTU1Q7Z7A3 348 aaKnown RBP6.54□□□□□ -1.36
YBX3-210ENST00000540975 BRSK2Q8IWQ3 736 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 DPP10Q8N608 796 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 RILPL2Q969X0 211 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 LYZL4Q96KX0 146 aa6.54□□□□□ -1.36
YBX3-210ENST00000540975 WDR77Q9BQA1 342 aaPredicted RBP6.54□□□□□ -1.36
YBX3-210ENST00000540975 RBM38Q9H0Z9 239 aaKnown RBP6.54□□□□□ -1.36
YBX3-210ENST00000540975 NBNO60934 754 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 TK1P04183 234 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 DHRS4L1P0CG22 281 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 PRKCHP24723 683 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 ARRB2P32121 409 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 THBS3P49746 956 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 HTR6P50406 440 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 TAF5Q15542 800 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 TMEM268Q5VZI3 342 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 CAMK1DQ8IU85 385 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 SUGP1Q8IWZ8 645 aaKnown RBP6.53□□□□□ -1.36
YBX3-210ENST00000540975 FTSJ3Q8IY81 847 aaKnown RBP6.53□□□□□ -1.36
YBX3-210ENST00000540975 NKAPQ8N5F7 415 aaKnown RBP6.53□□□□□ -1.36
YBX3-210ENST00000540975 C7orf57Q8NEG2 295 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 ENGASEQ8NFI3 743 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 LINS1Q8NG48 757 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 GABPB2Q8TAK5 448 aaPredicted RBP6.53□□□□□ -1.36
YBX3-210ENST00000540975 SPPL3Q8TCT6 385 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 URB1-AS1Q96HZ7 61 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 FRG2BQ96QU4 278 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 OSGIN2Q9Y236 505 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 DERAQ9Y315 318 aa6.53□□□□□ -1.36
YBX3-210ENST00000540975 FAM90A8PA6NJQ4 464 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 STMND1H3BQB6 276 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 TMCC1O94876 653 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 FAM90A13PP0C7W8 464 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 FAM90A24PP0C7X0 464 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 CDC25AP30304 524 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 CCKARP32238 428 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 CDKN2AP42771 156 aaKnown RBP6.52□□□□□ -1.37
YBX3-210ENST00000540975 NANOS2P60321 138 aaKnown RBP6.52□□□□□ -1.37
YBX3-210ENST00000540975 ACTR2P61160 394 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 GRAMD1BQ3KR37 738 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 RUNDC3AQ59EK9 446 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 LRRC57Q8N9N7 239 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 B4GALNT2Q8NHY0 566 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 HDAC7Q8WUI4 952 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 FAR1Q8WVX9 515 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 MARK4Q96L34 752 aa6.52□□□□□ -1.37
YBX3-210ENST00000540975 PPP1R10Q96QC0 940 aaKnown RBP6.52□□□□□ -1.37
YBX3-210ENST00000540975 MRPL44Q9H9J2 332 aaKnown RBP6.52□□□□□ -1.37
YBX3-210ENST00000540975 PLEKHB1Q9UF11 243 aaPredicted RBP6.52□□□□□ -1.37
YBX3-210ENST00000540975 CDH22Q9UJ99 828 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms