RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 KNTC1P50748 2209 aa12.34□□□□□ -0.43
CBX3P4-202ENST00000540428 SYNJ2BP-COX16A0A087WUM0 186 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 GTPBP10A4D1E9 387 aaKnown RBP12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 EIF4E1BA6NMX2 242 aaKnown RBP12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 ZNF18P17022 549 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 ACP1P24666 158 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 MAT2AP31153 395 aaKnown RBP12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 NOS2P35228 1153 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 EIF2S3P41091 472 aaKnown RBP12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 CDH4P55283 916 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 KRT83P78385 493 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 CENPCQ03188 943 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 CCDC15Q0P6D6 951 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 OLFML1Q6UWY5 402 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 LRRC69Q6ZNQ3 347 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 C11orf57Q6ZUT1 292 aaPredicted RBP12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 Q6ZVU0 165 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 SLC26A9Q7LBE3 791 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 TMEM145Q8NBT3 493 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 ZNF397Q8NF99 534 aaPredicted RBP12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 OR52K2Q8NGK3 314 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 SHC3Q92529 594 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 CCDC114Q96M63 670 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 DCBLD2Q96PD2 775 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 UBL7Q96S82 380 aaPredicted RBP12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 RRN3Q9NYV6 651 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 COX16Q9P0S2 106 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 VPS28Q9UK41 221 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 VANGL2Q9ULK5 521 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 CELSR3Q9NYQ7 3312 aa12.33□□□□□ -0.44
CBX3P4-202ENST00000540428 NBEAQ8NFP9 2946 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 BIN1O00499 593 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 DAB1O75553 588 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 CLCN6P51797 869 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 TAS2R38P59533 333 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 E2F1Q01094 437 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 PTK2Q05397 1052 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 BECN1Q14457 450 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 ARHGAP44Q17R89 818 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 BRMS1LQ5PSV4 323 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 ACBD5Q5T8D3 534 aaPredicted RBP12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 GJB7Q6PEY0 223 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 GBP6Q6ZN66 633 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 FAM183BPQ6ZVS7 135 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 ZDHHC17Q8IUH5 632 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 TMIEQ8NEW7 156 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 SNIP1Q8TAD8 396 aaKnown RBP12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 KLHDC7BQ96G42 594 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 CRACR2AQ9BSW2 395 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 C2orf49Q9BVC5 232 aaPredicted RBP12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 KLHL11Q9NVR0 708 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 CLCA2Q9UQC9 943 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 AK5Q9Y6K8 562 aa12.32□□□□□ -0.44
CBX3P4-202ENST00000540428 M0QYT0 321 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 TK2O00142 265 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 RRP8O43159 456 aaKnown RBP12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 TLX3O43711 291 aaPredicted RBP12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 PAGE1O75459 146 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 GRAP2O75791 330 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 SRCP12931 536 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 SLC9A1P19634 815 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 CHRNA3P32297 505 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 USP8P40818 1118 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 NUMBP49757 651 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 IRAK1P51617 712 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 CLDN6P56747 220 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 SLC6A3Q01959 620 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 SEMG2Q02383 582 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 NME3Q13232 169 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 ZNF211Q13398 564 aaPredicted RBP12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 EXOC3L4Q17RC7 722 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 HS1BP3Q53T59 392 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 PIP5KL1Q5T9C9 394 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 OR6B2Q6IFH4 312 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 SETD3Q86TU7 594 aaPredicted RBP12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 DCBLD1Q8N8Z6 715 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 DCAF4L2Q8NA75 395 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 C1orf131Q8NDD1 294 aaKnown RBP12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 OR2A12Q8NGT7 310 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 FAM174AQ8TBP5 190 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 BAP1Q92560 729 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 PGAP3Q96FM1 320 aaPredicted RBP12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 IFT43Q96FT9 208 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 CRELD1Q96HD1 420 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 NPY6RQ99463 290 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 MUC3BQ9H195 1237 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 PRORYQ9H606 182 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 ARHGEF38Q9NXL2 777 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 RWDD2AQ9UIY3 292 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 STAP1Q9ULZ2 295 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 PAXBP1Q9Y5B6 917 aa12.31□□□□□ -0.44
CBX3P4-202ENST00000540428 LOC400499M0QZD8 3231 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 A0A1W2PQU0 124 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 F9P00740 461 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 PRNPP04156 253 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 ERBB2P04626 1255 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 CTSLP07711 333 aa12.3□□□□□ -0.44
CBX3P4-202ENST00000540428 RHOCP08134 193 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms