RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 CD72P21854 359 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 TARSP26639 723 aaKnown RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 EPHB2P29323 1055 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 OR1E1P30953 314 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 L1CAMP32004 1257 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 ETFBP38117 255 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 SOX9P48436 509 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 VAV2P52735 878 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 CDH4P55283 916 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 HDAC4P56524 1084 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 TPI1P60174 286 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 PITX1P78337 314 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 KDSRQ06136 332 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 SULT2A1Q06520 285 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 DMC1Q14565 340 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 EIF4HQ15056 248 aaKnown RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 PPP6R3Q5H9R7 873 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-212ENST00000539975 FBXL22Q6P050 247 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 BMP8AQ7Z5Y6 402 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 ANKS1BQ7Z6G8 1248 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 DAAM2Q86T65 1068 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 DNAAF5Q86Y56 855 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 FAM217AQ8IXS0 508 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 AHI1Q8N157 1196 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 CFAP52Q8N1V2 620 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 FBXL6Q8N531 539 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 NIPA2Q8N8Q9 360 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 PJA1Q8NG27 643 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 KIAA1524Q8TCG1 905 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 WFIKKN2Q8TEU8 576 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 UBE2Q2Q8WVN8 375 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 HSPH1Q92598 858 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 TBC1D31Q96DN5 1066 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 ASIC4Q96FT7 647 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 ALS2CR12Q96Q35 445 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 PRRX2Q99811 253 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 IER2Q9BTL4 223 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 PACSIN1Q9BY11 444 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 CIPCQ9C0C6 399 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 MUC3BQ9H195 1237 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 OSBPL2Q9H1P3 480 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 EPHX3Q9H6B9 360 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 LMAN1LQ9HAT1 526 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 LTB4R2Q9NPC1 389 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 ZFATQ9P243 1243 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 AP4E1Q9UPM8 1137 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 STARD13Q9Y3M8 1113 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 HS3ST4Q9Y661 456 aa6.66□□□□□ -1.34
SNHG1-212ENST00000539975 TCRBV5S1A1TA0A578 114 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 OTOL1A6NHN0 477 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 H3BRJ5 948 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 SYNCRIPO60506 623 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 GREM1O60565 184 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 LRCH4O75427 683 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 ALDH1A2O94788 518 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 PENKP01210 267 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 RHOCP08134 193 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 TNNT1P13805 278 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 TFE3P19532 575 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 AOC1P19801 751 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 MIPP30301 263 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 SLC6A4P31645 630 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 MAN1A1P33908 653 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 GJC1P36383 396 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 RPS9P46781 194 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 ATXN1P54253 815 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 NRLP54845 237 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 GEMIN4P57678 1058 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 RPS24P62847 133 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 MRPS21P82921 87 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 SCAPQ12770 1279 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 EIF4EBP2Q13542 120 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 STARD3Q14849 445 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 PDK2Q15119 407 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 HSF5Q4G112 596 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 C2orf27AQ580R0 203 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 FAM133BQ5BKY9 247 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 TMEM196Q5HYL7 178 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 EOGTQ5NDL2 527 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 FYB2Q5VWT5 728 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 IL31Q6EBC2 164 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 RAD9BQ6WBX8 426 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 C20orf204Q6ZNR8 217 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 CHST9Q7L1S5 443 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 SETD3Q86TU7 594 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 RHOT1Q8IXI2 618 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 CHPFQ8IZ52 775 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 CCAR2Q8N163 923 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 RNF10Q8N5U6 811 aaKnown RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 TERB1Q8NA31 727 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 FIBINQ8TAL6 211 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 RIN3Q8TB24 985 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 TEKT4Q8WW24 435 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 WBP2Q969T9 261 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 ARHGEF26Q96DR7 871 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 TRIM44Q96DX7 344 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-212ENST00000539975 CHFRQ96EP1 664 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 CALN1Q9BXU9 219 aa6.65□□□□□ -1.34
SNHG1-212ENST00000539975 IRF2BPLQ9H1B7 796 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms