RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SPA17Q15506 151 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 HNRNPA1L2Q32P51 320 aaKnown RBP16.12■□□□□ 0.17
RPAIN-206ENST00000539417 MAP7D1Q3KQU3 841 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 BOLA3Q53S33 107 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 KIAA1324Q6UXG2 1013 aaKnown RBP16.12■□□□□ 0.17
RPAIN-206ENST00000539417 POLNQ7Z5Q5 900 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 TMPRSS6Q8IU80 811 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 PSTKQ8IV42 348 aaKnown RBP16.12■□□□□ 0.17
RPAIN-206ENST00000539417 SH2D3CQ8N5H7 860 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 TEKT4Q8WW24 435 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 GAB3Q8WWW8 586 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 TSC1Q92574 1164 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 HMCESQ96FZ2 354 aa16.12■□□□□ 0.17
RPAIN-206ENST00000539417 ATP9BO43861 1147 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 BUB1BO60566 1050 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-206ENST00000539417 RAMP2O60895 175 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 ZNF821O75541 412 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-206ENST00000539417 RPP40O75818 363 aaKnown RBP16.11■□□□□ 0.17
RPAIN-206ENST00000539417 MAN1A1P33908 653 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 P2RY2P41231 377 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 METAP1P53582 386 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 DLG2Q15700 870 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 IL31Q6EBC2 164 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 ZC3H14Q6PJT7 736 aaKnown RBP16.11■□□□□ 0.17
RPAIN-206ENST00000539417 ZNF783Q6ZMS7 281 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 Q6ZVU0 165 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 KBTBD6Q86V97 674 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 ARHGAP12Q8IWW6 846 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 STK40Q8N2I9 435 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 KDM1BQ8NB78 822 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 OR2T3Q8NH03 318 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 CSPG4P5Q96PW8 444 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 FAM129BQ96TA1 746 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 NCAPGQ9BPX3 1015 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 SLC39A8Q9C0K1 460 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 EPC1Q9H2F5 836 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 LRRC19Q9H756 370 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 CATSPERBQ9H7T0 1116 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 PRDM16Q9HAZ2 1276 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 TRIM10Q9UDY6 481 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 HS3ST2Q9Y278 367 aa16.11■□□□□ 0.17
RPAIN-206ENST00000539417 NUP205Q92621 2012 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 RASA4BC9J798 803 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 RASA4O43374 803 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 BUB1O43683 1085 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 COMTP21964 271 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 PLA2G5P39877 138 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 NOP2P46087 812 aaKnown RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 CDH6P55285 790 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 RPS14P62263 151 aaKnown RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 KRT83P78385 493 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 SULT2A1Q06520 285 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 SIM2Q14190 667 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 POLD3Q15054 466 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 ACCSLQ4AC99 568 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 ARHGAP36Q6ZRI8 547 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 PRR23BQ6ZRT6 265 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 UMODL1-AS1Q8N2C9 162 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 ATP11CQ8NB49 1132 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 RAPGEF5Q92565 580 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 C2orf49Q9BVC5 232 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 DUSP15Q9H1R2 295 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 MAGEH1Q9H213 219 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 TNKS2Q9H2K2 1166 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 SUN2Q9UH99 717 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 SLC25A13Q9UJS0 675 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 CYP8B1Q9UNU6 501 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 FCF1Q9Y324 198 aaKnown RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 ZFHX2Q9C0A1 2572 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 IGHV1OR15-9A0A0B4J2B8 117 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 PRR23AA6NEV1 266 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 FGF10O15520 208 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 ARHGAP25P42331 645 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 HCAR3P49019 387 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 VASPP50552 380 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 HADHBP55084 474 aaKnown RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 DPYSL3Q14195 570 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 HADHQ16836 314 aaKnown RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 AFMIDQ63HM1 303 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 DEFB119Q8N690 84 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 NKD2Q969F2 451 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 SIPA1Q96FS4 1042 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 PPP1R9BQ96SB3 815 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 RSPH9Q9H1X1 276 aaPredicted RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 RETREG1Q9H6L5 497 aa16.1■□□□□ 0.17
RPAIN-206ENST00000539417 SMG5Q9UPR3 1016 aaKnown RBP16.1■□□□□ 0.17
RPAIN-206ENST00000539417 ABCA7Q8IZY2 2146 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 GPR179Q6PRD1 2367 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 EDDM13A0A1B0GTR0 161 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 H3BRJ5 948 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 J3KR12 359 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 DAPK3O43293 454 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 KDELR3O43731 214 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 BNIP3LO60238 219 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 TNNT1P13805 278 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 HTR7P34969 479 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 SERPINH1P50454 418 aaKnown RBP16.09■□□□□ 0.17
RPAIN-206ENST00000539417 VAV2P52735 878 aa16.09■□□□□ 0.17
RPAIN-206ENST00000539417 SERINC3Q13530 473 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms