RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SNX10Q9Y5X0 201 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 XIRP2A4UGR9 3374 aa9.06□□□□□ -0.96
DDB1-213ENST00000539332 IGLV3-10A0A075B6K4 115 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 A0A0A0MRY4 1105 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 TCRBV7S3A2A0A539 114 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 ALOX15BO15296 676 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 CCL16O15467 120 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 OPHN1O60890 802 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 MAP3K6O95382 1288 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 ANP32DO95626 131 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 TBX18O95935 607 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 NQO1P15559 274 aaKnown RBP9.05□□□□□ -0.96
DDB1-213ENST00000539332 TPSB2P20231 275 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 HOXA9P31269 272 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 SKIV2L2P42285 1042 aaKnown RBP9.05□□□□□ -0.96
DDB1-213ENST00000539332 MAGEA4P43358 317 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 PPP3CCP48454 512 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 TUBP50607 506 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 MLLT6P55198 1093 aaPredicted RBP9.05□□□□□ -0.96
DDB1-213ENST00000539332 TBX4P57082 545 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 PPIDQ08752 370 aaKnown RBP9.05□□□□□ -0.96
DDB1-213ENST00000539332 MTA1Q13330 715 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 SEMA5AQ13591 1074 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 SLC29A2Q14542 456 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 TPSAB1Q15661 275 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 DUSP6Q16828 381 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 TNFAIP8L3Q5GJ75 292 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 C10orf120Q5SQS8 335 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 PIK3R6Q5UE93 754 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 AFMIDQ63HM1 303 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 AP1ARQ63HQ0 302 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 HEATR6Q6AI08 1181 aaKnown RBP9.05□□□□□ -0.96
DDB1-213ENST00000539332 CAPRIN2Q6IMN6 1127 aaKnown RBP9.05□□□□□ -0.96
DDB1-213ENST00000539332 CCDC25Q86WR0 208 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 ARHGAP12Q8IWW6 846 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 CFAP61Q8NHU2 1237 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 HTR3CQ8WXA8 447 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 SPATA13Q96N96 652 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 TTC25Q96NG3 672 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 LRRC3Q9BY71 257 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 PRDM12Q9H4Q4 367 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 IL21Q9HBE4 155 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 TRPM5Q9NZQ8 1165 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 DPP7Q9UHL4 492 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 COLQQ9Y215 455 aaPredicted RBP9.05□□□□□ -0.96
DDB1-213ENST00000539332 HBS1LQ9Y450 684 aaKnown RBP9.05□□□□□ -0.96
DDB1-213ENST00000539332 HS3ST4Q9Y661 456 aa9.05□□□□□ -0.96
DDB1-213ENST00000539332 KLHL33A6NCF5 533 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 RGS16O15492 202 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 F11P03951 625 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 SHBGP04278 402 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 HNRNPA1P09651 372 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDB1-213ENST00000539332 TSHRP16473 764 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 MX2P20592 715 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 EPHB2P29323 1055 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ATP5DP30049 168 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 MAGEA3P43357 314 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ARL4CP56559 192 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 GAD2Q05329 585 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 WASHC5Q12768 1159 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 EFEMP1Q12805 493 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 PDAP1Q13442 181 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 RBBP5Q15291 538 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 HIF1AQ16665 826 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 PABPC1LQ4VXU2 614 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 CMPK2Q5EBM0 449 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 HECTD3Q5T447 861 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 PPP1R21Q6ZMI0 780 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 GAREM2Q75VX8 874 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 TMC8Q8IU68 726 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 TP53INP2Q8IXH6 220 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 KLHDC8BQ8IXV7 354 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 LZTR1Q8N653 840 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ZSCAN18Q8TBC5 510 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 CCDC110Q8TBZ0 833 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 ATXN2LQ8WWM7 1075 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 RNF34Q969K3 372 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 P2RY11Q96G91 374 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 BTN2A3PQ96KV6 586 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 TSGA13Q96PP4 275 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 RAB3IPQ96QF0 476 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 LGMNQ99538 433 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 PRMT1Q99873 361 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 WDR83Q9BRX9 315 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 ROPN1BQ9BZX4 212 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 ROPN1Q9HAT0 212 aaPredicted RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 LRRC4CQ9HCJ2 640 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 INTS9Q9NV88 658 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 ZDHHC7Q9NXF8 308 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 MARCH2Q9P0N8 246 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 IGSF9Q9P2J2 1179 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 PPARGC1AQ9UBK2 798 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 CTNNAL1Q9UBT7 734 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 XPO7Q9UIA9 1087 aaKnown RBP9.04□□□□□ -0.96
DDB1-213ENST00000539332 E9PAM4 449 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 RNF103O00237 685 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 MTSS1O43312 755 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 SUN1O94901 812 aa9.04□□□□□ -0.96
DDB1-213ENST00000539332 METTL18O95568 372 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms