RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 CD70P32970 193 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 EIF3EP60228 445 aaKnown RBP17.64■□□□□ 0.41
CLN6-202ENST00000538696 KDSRQ06136 332 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 MESP2Q0VG99 397 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 LMAN2Q12907 356 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 PTK6Q13882 451 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 BYSLQ13895 437 aaKnown RBP17.64■□□□□ 0.41
CLN6-202ENST00000538696 NOMO1Q15155 1222 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 PPP1R7Q15435 360 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 MLF2Q15773 248 aaPredicted RBP17.64■□□□□ 0.41
CLN6-202ENST00000538696 SLC44A4Q53GD3 710 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLN6-202ENST00000538696 GRK7Q8WTQ7 553 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 SLC2A11Q9BYW1 496 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 NOL6Q9H6R4 1146 aaKnown RBP17.64■□□□□ 0.41
CLN6-202ENST00000538696 C10orf88Q9H8K7 445 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 CA14Q9ULX7 337 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 NFU1Q9UMS0 254 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 SNX24Q9Y343 169 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 NEU2Q9Y3R4 380 aa17.64■□□□□ 0.41
CLN6-202ENST00000538696 F5P12259 2224 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 MCF2LO15068 1137 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 MFSD11O43934 449 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 ECHS1P30084 290 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 EIF2DP41214 584 aaKnown RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 CSKP41240 450 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 RPL21P46778 160 aaKnown RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 DGKGP49619 791 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 GBE1Q04446 702 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 TRIP13Q15645 432 aaPredicted RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 C6orf118Q5T5N4 469 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 GRAMD4Q6IC98 578 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 TMCO3Q6UWJ1 677 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 TPRG1Q6ZUI0 275 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 SYDE1Q6ZW31 735 aaPredicted RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 PRUNE1Q86TP1 453 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 SETD3Q86TU7 594 aaPredicted RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 RALGPS2Q86X27 583 aaPredicted RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 UBALD2Q8IYN6 164 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 ALLCQ8N6M5 410 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 ZNF557Q8N988 423 aaPredicted RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 NETO2Q8NC67 525 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 AENQ8WTP8 325 aaKnown RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 HNRNPLLQ8WVV9 542 aaKnown RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 MSANTD3Q96H12 275 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 NEUROG2Q9H2A3 272 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 ABCB8Q9NUT2 735 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 ZNF446Q9NWS9 450 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 ZNF148Q9UQR1 794 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 DRG1Q9Y295 367 aaKnown RBP17.63■□□□□ 0.41
CLN6-202ENST00000538696 SLC27A6Q9Y2P4 619 aa17.63■□□□□ 0.41
CLN6-202ENST00000538696 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 MAP3K6O95382 1288 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 GAS8O95995 478 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 ITGAVP06756 1048 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 PABPC1P11940 636 aaKnown RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 GLULP15104 373 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 ZFXP17010 805 aaPredicted RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 MZF1P28698 734 aaPredicted RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 CUL1Q13616 776 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 PAFAH1B3Q15102 231 aaKnown RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 GEN1Q17RS7 908 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 BEND6Q5SZJ8 279 aaPredicted RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 AFMIDQ63HM1 303 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 B4GALNT4Q76KP1 1039 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 KIAA0907Q7Z7F0 614 aaPredicted RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 CCDC117Q8IWD4 279 aaPredicted RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 ARHGAP12Q8IWW6 846 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 TP53INP2Q8IXH6 220 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 UMODL1-AS1Q8N2C9 162 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 GLIS1Q8NBF1 620 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 P3H4Q92791 437 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 CELF6Q96J87 481 aaKnown RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 ARHGEF3Q9NR81 526 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 FAM114A2Q9NRY5 505 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 GRHL1Q9NZI5 618 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 KIAA1522Q9P206 1035 aaPredicted RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 DEC1Q9P2X7 70 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 WNT16Q9UBV4 365 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 GGA2Q9UJY4 613 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 INTS6Q9UL03 887 aaKnown RBP17.62■□□□□ 0.41
CLN6-202ENST00000538696 HEY1Q9Y5J3 304 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 OR51B4Q9Y5P0 310 aa17.62■□□□□ 0.41
CLN6-202ENST00000538696 ILVBLA1L0T0 632 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 KRBA1A5PL33 1030 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 RAMP2O60895 175 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 KRT14P02533 472 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 ETS1P14921 441 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 VPS41P49754 854 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 NUMBP49757 651 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 GALK1P51570 392 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 ZXDAP98168 799 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 GNA12Q03113 381 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 SLC10A2Q12908 348 aaPredicted RBP17.61■□□□□ 0.41
CLN6-202ENST00000538696 HLTFQ14527 1009 aaKnown RBP eCLIP17.61■□□□□ 0.41
CLN6-202ENST00000538696 PON2Q15165 354 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 FUT11Q495W5 492 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 RNF219Q5W0B1 726 aaPredicted RBP17.61■□□□□ 0.41
CLN6-202ENST00000538696 ZNF783Q6ZMS7 281 aa17.61■□□□□ 0.41
CLN6-202ENST00000538696 SFTPA1Q8IWL2 248 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms