RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ITIH5Q86UX2 942 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 PEX5LQ8IYB4 626 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 PPM1KQ8N3J5 372 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 UBR7Q8N806 425 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 ATP6V0D2Q8N8Y2 350 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 LEMD2Q8NC56 503 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 TBC1D15Q8TC07 691 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 FNIP1Q8TF40 1166 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 ZNF526Q8TF50 670 aaPredicted RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 PDCD6IPQ8WUM4 868 aaKnown RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 CHAC2Q8WUX2 184 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 RASSF5Q8WWW0 418 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 RSAD2Q8WXG1 361 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 LENG9Q96B70 501 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 C12orf43Q96C57 262 aaKnown RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 NRBF2Q96F24 287 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 DYNLL2Q96FJ2 89 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 CCDC17Q96LX7 622 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 MFSD14AQ96MC6 490 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 NSMCE3Q96MG7 304 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 ZNF347Q96SE7 839 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 YME1L1Q96TA2 773 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 HEPHQ9BQS7 1158 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 WDR12Q9GZL7 423 aaKnown RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 ADAMTS10Q9H324 1103 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 SMYD3Q9H7B4 428 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 GPN2Q9H9Y4 310 aaPredicted RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 MRM3Q9HC36 420 aaKnown RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 VTA1Q9NP79 307 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 CYP26B1Q9NR63 512 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 HOMER2Q9NSB8 354 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 OLAHQ9NV23 265 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 KLHL3Q9UH77 587 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 CNTN6Q9UQ52 1028 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 CARD8Q9Y2G2 431 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 STRCP1A6NGW2 1772 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TMEM191CA6NGB0 347 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 E5RJQ4 531 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 PSMD12O00232 456 aaPredicted RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 RNF103O00237 685 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TRIM38O00635 465 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 KMOO15229 486 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 AQP9O43315 295 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 GAS2O43903 313 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 RSL1D1O76021 490 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 LYPLA2O95372 231 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 OXSR1O95747 527 aaPredicted RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 FUCA1P04066 466 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 KRT1P04264 644 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TMEM191BP0C7N4 346 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 COL6A2P12110 1019 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 FSTP19883 344 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 MYF6P23409 242 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 CDKN2BP42772 138 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 SLC1A6P48664 564 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 KRT6CP48668 564 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TRPC1P48995 793 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 PRELPP51888 382 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TAS2R40P59535 323 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 RIPPLY1Q0D2K3 151 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 KLF10Q13118 480 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 OXA1LQ15070 435 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 UBE2SQ16763 222 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 PHKG1Q16816 387 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 HADHQ16836 314 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 TRIM71Q2Q1W2 868 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 TRIM16LQ309B1 348 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 MGAT5BQ3V5L5 792 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 CEP55Q53EZ4 464 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 FNBP1LQ5T0N5 605 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 INTS11Q5TA45 600 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 MBLAC2Q68D91 279 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TTC23LQ6PF05 361 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 EPGNQ6UW88 154 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 MAMDC4Q6UXC1 1216 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 NSMFQ6X4W1 530 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 AMIGO2Q86SJ2 522 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 CLVS1Q8IUQ0 354 aaPredicted RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 IQCF2Q8IXL9 164 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 ABRAQ8N0Z2 381 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 SIX6OS1Q8N1H7 587 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 ARMC10Q8N2F6 343 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 SLC25A41Q8N5S1 370 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 POU5F2Q8N7G0 328 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 ANKFN1Q8N957 763 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 SNX31Q8N9S9 440 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 RAB2BQ8WUD1 216 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TFB1MQ8WVM0 346 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 PIGBQ92521 554 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 RTP4Q96DX8 246 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 FAM46AQ96IP4 442 aaKnown RBP6.83□□□□□ -1.32
USP28-207ENST00000538475 FBXL18Q96ME1 805 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 HEMGNQ9BXL5 484 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 VPS33BQ9H267 617 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 TPK1Q9H3S4 243 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 EFCAB1Q9HAE3 211 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 IFT122Q9HBG6 1241 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 ANKHQ9HCJ1 492 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 CYP4F12Q9HCS2 524 aa6.83□□□□□ -1.32
USP28-207ENST00000538475 HMG20AQ9NP66 347 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms