RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 GEMIN4P57678 1058 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 BASP1P80723 227 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PPIDQ08752 370 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZNF235Q14590 738 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DHCR24Q15392 516 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PUS10Q3MIT2 529 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 C5orf22Q49AR2 442 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PREPLQ4J6C6 727 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MARC1Q5VT66 337 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RETSATQ6NUM9 610 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PARM1Q6UWI2 310 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZNF783Q6ZMS7 281 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NLRP14Q86W24 1093 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZNF683Q8IZ20 524 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZDHHC14Q8IZN3 488 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ADGRG2Q8IZP9 1017 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NPWQ8N729 165 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 KIAA1958Q8N8K9 716 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 OR7D4Q8NG98 312 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TTC8Q8TAM2 541 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HDAC11Q96DB2 347 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HMCESQ96FZ2 354 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 P2RY11Q96G91 374 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ZFYVE19Q96K21 471 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PRICKLE1Q96MT3 831 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 VAT1Q99536 393 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ERP44Q9BS26 406 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 C2orf49Q9BVC5 232 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CINPQ9BW66 212 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 KLC2Q9H0B6 622 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 EBF3Q9H4W6 596 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TRPV4Q9HBA0 871 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DNAJC17Q9NVM6 304 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 UBA2Q9UBT2 640 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MTRF1LQ9UGC7 380 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RSPH14Q9UHP6 348 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SLC25A13Q9UJS0 675 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TRHDEQ9UKU6 1024 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SNX24Q9Y343 169 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NOTCH4Q99466 2003 aa10.9□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NUP210Q8TEM1 1887 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TARSL2A2RTX5 802 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ZSCAN5CA6NGD5 496 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 KCNK1O00180 336 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 MATN3O15232 486 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 KDELR3O43731 214 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ECI2O75521 394 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CCNB1P14635 433 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ETS1P14921 441 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 POLR2EP19388 210 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ACVRL1P37023 503 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CSKP41240 450 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 DGKGP49619 791 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SARNPP82979 210 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ZNF33AQ06730 810 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 IL10RBQ08334 325 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SERINC3Q13530 473 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SLC12A1Q13621 1099 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RUNX3Q13761 415 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PTK6Q13882 451 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 DSG2Q14126 1118 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 OASLQ15646 514 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ELF2Q15723 593 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 P3H1Q32P28 736 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 MAP9Q49MG5 647 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ACCSLQ4AC99 568 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 IZUMO3Q5VZ72 239 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 TRIM68Q6AZZ1 485 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PTCRAQ6ISU1 281 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 VITQ6UXI7 678 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 LEKR1Q6ZMV7 388 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FAM217AQ8IXS0 508 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RYBPQ8N488 228 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FIBINQ8TAL6 211 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CCDC110Q8TBZ0 833 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ARHGEF2Q92974 986 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 MYEOVQ96EZ4 313 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SNF8Q96H20 258 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 AGAP3Q96P47 875 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PHF7Q9BWX1 381 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 SLC2A11Q9BYW1 496 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PCDH9Q9HC56 1237 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 NDFIP2Q9NV92 336 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RBM22Q9NW64 420 aaKnown RBP eCLIP10.89□□□□□ -0.676e-10■■□□□ 12.5
TNFRSF1A-211ENST00000538363 DEC1Q9P2X7 70 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 LIMD1Q9UGP4 676 aa10.89□□□□□ -0.67
TNFRSF1A-211ENST00000538363 A0A0A0MRY4 1105 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 F5H423 210 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 CHADO15335 359 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PSMD3O43242 534 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 GREM1O60565 184 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 OPHN1O60890 802 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ZSCAN5DPP0CG00 497 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ARSAP15289 507 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 ITIH2P19823 946 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 RPL22P35268 128 aaKnown RBP10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 FDFT1P37268 417 aa10.88□□□□□ -0.67
TNFRSF1A-211ENST00000538363 PTGIRP43119 386 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms