RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CNPY4Q8N129 248 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 KRT78Q8N1N4 520 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 GALNT4Q8N4A0 578 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 SPPL2BQ8TCT7 592 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 USP7Q93009 1102 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 CPNE1Q99829 537 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ABCG8Q9H221 673 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 DPEP3Q9H4B8 488 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 POMKQ9H5K3 350 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 AGO1Q9UL18 857 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 B2RBV5 119 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 OPLAHO14841 1288 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 RNASEH2AO75792 299 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 IFNA16P05015 189 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 EPHX1P07099 455 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ELFN1P0C7U0 828 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 NFKB1P19838 968 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 GUCA1AP43080 201 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 TRPC1P48995 793 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ARSHQ5FYA8 562 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 TJAP1Q5JTD0 557 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 SEL1L3Q68CR1 1132 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 RFWD3Q6PCD5 774 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 MILR1Q7Z6M3 343 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PSTKQ8IV42 348 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 COLGALT2Q8IYK4 626 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 OSCP1Q8WVF1 389 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 TSPAN18Q96SJ8 248 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 DNAJC18Q9H819 358 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 AVENQ9NQS1 362 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 FBXO6Q9NRD1 293 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.45□□□□□ -1.541e-6■■■■■ 33.9
LRP6-203ENST00000538239 NOP53Q9NZM5 478 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 GPN3Q9UHW5 284 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 NFATC1O95644 943 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 FAM107AO95990 144 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 FGRP09769 529 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 SNHG28P0DPA3 235 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 IMPDH2P12268 514 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ICAM3P32942 547 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 DPYSL3Q14195 570 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 SLC9A5Q14940 896 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 PARP6Q2NL67 630 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 TRIM60Q495X7 471 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 TMC5Q6UXY8 1006 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 MON1AQ86VX9 555 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 C11orf84Q9BUA3 381 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 NIFKQ9BYG3 293 aaKnown RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 MID1IP1Q9NPA3 183 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 DEC1Q9P2X7 70 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 GABRQQ9UN88 632 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 PER2O15055 1255 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 SEC22BO75396 215 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ENO2P09104 434 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 CDH2P19022 906 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 PLK1P53350 603 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 RPS7P62081 194 aaKnown RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 CYP2A13Q16696 494 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 DNAL1Q4LDG9 190 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ATP13A4Q4VNC1 1196 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 INTS6LQ5JSJ4 861 aaKnown RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 N4BP2L1Q5TBK1 243 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 C12orf50Q8NA57 414 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 OR14C36Q8NHC7 312 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 REPS1Q96D71 796 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 KLHL5Q96PQ7 755 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 UNC93B1Q9H1C4 597 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 NMRAL1Q9HBL8 299 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 HECAQ9UBI9 543 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 PHTF1Q9UMS5 762 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ANKDD1BA6NHY2 528 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 E9PBE3 544 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 DNALI1O14645 258 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 KLHL41O60662 606 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 PPP1R37O75864 691 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ZNF682O95780 498 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 POLE2P56282 527 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 PLOD1Q02809 727 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 AASDHQ4L235 1098 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 MPPE1Q53F39 396 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 FAM151BQ6UXP7 276 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 GPSM1Q86YR5 675 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 CLYBLQ8N0X4 340 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ZNF655Q8N720 491 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 ARL14EPQ8N8R7 260 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 ZNF296Q8WUU4 475 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 DNAJC1Q96KC8 554 aaKnown RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 FCRL2Q96LA5 508 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 MFSD14AQ96MC6 490 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 PABPC3Q9H361 631 aaKnown RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 NRDE2Q9H7Z3 1164 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 CACNB4O00305 520 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 SCAMP1O15126 338 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 BAIAP3O94812 1187 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 ATP4AP20648 1035 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 DGKAP23743 735 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 CRABP2P29373 138 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 SSTR1P30872 391 aa5.44□□□□□ -1.54
LRP6-203ENST00000538239 RPA3P35244 121 aaPredicted RBP5.44□□□□□ -1.54
LRP6-203ENST00000538239 ARL2P36404 184 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms