RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 HS3ST2Q9Y278 367 aa8.62□□□□□ -1.03
SPARC-208ENST00000538026 LUC7L2Q9Y383 392 aaKnown RBP8.62□□□□□ -1.03
SPARC-208ENST00000538026 TRPM6Q9BX84 2022 aa8.62□□□□□ -1.03
SPARC-208ENST00000538026 TMEM131Q92545 1883 aa8.62□□□□□ -1.03
SPARC-208ENST00000538026 LNP1A1A4G5 178 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 TARSL2A2RTX5 802 aaKnown RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 TYW5A2RUC4 315 aaKnown RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 MAP3K13O43283 966 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 ZNF217O75362 1048 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 LRCH4O75427 683 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 CYP1A2P05177 515 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 CTSLP07711 333 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 RHOCP08134 193 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 RHOQP17081 205 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 MIPP30301 263 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 OR1E1P30953 314 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 L1CAMP32004 1257 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 DRD3P35462 400 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 EIF4A3P38919 411 aaKnown RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 TPM4P67936 248 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 BNC1Q01954 994 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 GFPT1Q06210 699 aaPredicted RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 ZNF33AQ06730 810 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 MTA1Q13330 715 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 DLG2Q15700 870 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 SPECC1LQ69YQ0 1117 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 SCYL2Q6P3W7 929 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 DCUN1D2Q6PH85 259 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 Q6ZVU0 165 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 SLFN11Q7Z7L1 901 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 SETD3Q86TU7 594 aaPredicted RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 FAM124AQ86V42 546 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 MMAAQ8IVH4 418 aaKnown RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 TP53INP2Q8IXH6 220 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 DRC7Q8IY82 874 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 NETO2Q8NC67 525 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 CHST14Q8NCH0 376 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 OR2A12Q8NGT7 310 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 FNIP1Q8TF40 1166 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 PRCCQ92733 491 aaPredicted RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 ZNF653Q96CK0 615 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 HSPA12BQ96MM6 686 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 KCTD15Q96SI1 283 aaPredicted RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 NEUROG2Q9H2A3 272 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 PABPC3Q9H361 631 aaKnown RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 CAPN10Q9HC96 672 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 VPS45Q9NRW7 570 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 TMEM51Q9NW97 253 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 TMEM248Q9NWD8 314 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 MYO1AQ9UBC5 1043 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 PCSK1NQ9UHG2 260 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 DNAI1Q9UI46 699 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 VPS28Q9UK41 221 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 PPM1HQ9ULR3 514 aa8.61□□□□□ -1.03
SPARC-208ENST00000538026 TP53BP1Q12888 1972 aaPredicted RBP8.61□□□□□ -1.03
SPARC-208ENST00000538026 GOLGA4Q13439 2230 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 LRRK1Q38SD2 2015 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 EPG5Q9HCE0 2579 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 EDDM13A0A1B0GTR0 161 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 METTL12A8MUP2 240 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 WNT9AO14904 365 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 MOCS3O95396 460 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 IGHV4-34P06331 123 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 PSMA2P25787 234 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 SLC8A1P32418 973 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 GALCP54803 685 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 ADKP55263 362 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 TAS2R38P59533 333 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 GNA12Q03113 381 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 SULT2A1Q06520 285 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 BYSLQ13895 437 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 CST6Q15828 149 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 LYSMD4Q5XG99 296 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 ALKBH5Q6P6C2 394 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 SARM1Q6SZW1 724 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 LRRC31Q6UY01 552 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 SLC36A4Q6YBV0 504 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 LEKR1Q6ZMV7 388 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 CYP2U1Q7Z449 544 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 C11orf74Q86VG3 221 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 SYT12Q8IV01 421 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 GPR161Q8N6U8 529 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 DCAF4L2Q8NA75 395 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 OR8K1Q8NGG5 319 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 OR2I1PQ8NGU4 316 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 ARHGEF2Q92974 986 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 SPACA7Q96KW9 195 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 SPON2Q9BUD6 331 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.6□□□□□ -1.03
SPARC-208ENST00000538026 SNRNP25Q9BV90 132 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 MUC3BQ9H195 1237 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 MFHAS1Q9Y4C4 1052 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 PAXBP1Q9Y5B6 917 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 BZW2Q9Y6E2 419 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 DSPP15924 2871 aaKnown RBP8.6□□□□□ -1.03
SPARC-208ENST00000538026 SHROOM3Q8TF72 1996 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 KNTC1P50748 2209 aa8.6□□□□□ -1.03
SPARC-208ENST00000538026 ANKRD36A6QL64 1941 aa8.59□□□□□ -1.03
SPARC-208ENST00000538026 TDRD6O60522 2096 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms