RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 NETO2Q8NC67 525 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 ZNF75CPQ92670 426 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 RNF34Q969K3 372 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TIFAQ96CG3 184 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SLC22A12Q96S37 553 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CYTH2Q99418 400 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PAIP2Q9BPZ3 127 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TRIM62Q9BVG3 475 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 VPS11Q9H270 941 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 USP29Q9HBJ7 922 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MARCH2Q9P0N8 246 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 C15orf41Q9Y2V0 281 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TEX264Q9Y6I9 313 aa13.26□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SCAMP3O14828 347 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 COCHO43405 550 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MAP3K6O95382 1288 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TGM2P21980 687 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 BMP8BP34820 402 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 ADRA1BP35368 520 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CCR2P41597 374 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MSH2P43246 934 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MAGEA6P43360 314 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 NRIP1P48552 1158 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PPM1LQ5SGD2 360 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 FAM182AQ5T1J6 154 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 LVRNQ6Q4G3 990 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 NPNTQ6UXI9 565 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CAPN12Q6ZSI9 719 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CCDC149Q6ZUS6 474 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 GAREM2Q75VX8 874 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MAB21L3Q8N8X9 362 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 VN1R2Q8NFZ6 395 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 FCRL2Q96LA5 508 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CEP295NLQ96MC4 621 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SERPINB11Q96P15 392 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CORO1BQ9BR76 489 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 LRRC3Q9BY71 257 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PRO3102Q9H379 93 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 WDCPQ9H6R7 721 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TXLNGQ9NUQ3 528 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 RRN3Q9NYV6 651 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PAK5Q9P286 719 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 NYNRINQ9P2P1 1898 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CREB3O43889 395 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 DCTN3O75935 186 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 RPSAP08865 295 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 GABRR2P28476 465 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SLC18A2Q05940 514 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 NAA25Q14CX7 972 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SETDB1Q15047 1291 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PARP6Q2NL67 630 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 BBS9Q3SYG4 887 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 DARS2Q6PI48 645 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CCDC33Q8N5R6 958 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PQLC3Q8N755 202 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PLD5Q8N7P1 536 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PCDH19Q8TAB3 1148 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 C10orf82Q8WW14 230 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SLC44A1Q8WWI5 657 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 RNF38Q9H0F5 515 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TRPC7Q9HCX4 862 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SLCO1B3Q9NPD5 702 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 ETNK2Q9NVF9 386 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 COMMD8Q9NX08 183 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TRPM5Q9NZQ8 1165 aa13.25□□□□□ -0.29
CDK5RAP3-202ENST00000536708 IQANK1A0A1B0GTG1 560 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 A0A1W2PRU2 124 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SLC12A8A0AV02 714 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 BCLAF3A2AJT9 711 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 F11P03951 625 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 DHRS4L1P0CG22 281 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PAX7P23759 505 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 KCNQ1P51787 676 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 NTHL1P78549 312 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 BASP1P80723 227 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SCAPQ12770 1279 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 EFTUD2Q15029 972 aaKnown RBP eCLIP13.24□□□□□ -0.297e-16■□□□□ 10
CDK5RAP3-202ENST00000536708 TXNDC8Q6A555 127 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SLC9A4Q6AI14 798 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 C4orf22Q6V702 233 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SH2D5Q6ZV89 423 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PDZD8Q8NEN9 1154 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 AGAP11Q8TF27 550 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 LRRN4Q8WUT4 740 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 NSMCE1Q8WV22 266 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 NTAN1Q96AB6 310 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 FAF2Q96CS3 445 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CSPG4P5Q96PW8 444 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TMEM237Q96Q45 408 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CYP2S1Q96SQ9 504 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SIK2Q9H0K1 926 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MYLK2Q9H1R3 596 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 SMPD4Q9NXE4 827 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CDH22Q9UJ99 828 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 MAFFQ9ULX9 164 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 CHKBQ9Y259 395 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 TLR6Q9Y2C9 796 aa13.24□□□□□ -0.29
CDK5RAP3-202ENST00000536708 PAGE1O75459 146 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms