RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 STRADAQ7RTN6 431 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 SLC4A11Q8NBS3 891 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 LRRC15Q8TF66 581 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 CERS2Q96G23 380 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 EBNA1BP2Q99848 306 aaKnown RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 POLR1EQ9GZS1 481 aaKnown RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 UBA2Q9UBT2 640 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 EIF3LQ9Y262 564 aaKnown RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 STARD13Q9Y3M8 1113 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 SERPINH1P50454 418 aaKnown RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 SH3D19Q5HYK7 790 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 EXOSC4Q9NPD3 245 aaKnown RBP17.51■□□□□ 0.39
PHRF1-206ENST00000534320 SOX13Q9UN79 622 aa17.51■□□□□ 0.39
PHRF1-206ENST00000534320 EIF2B2P49770 351 aaKnown RBP17.5■□□□□ 0.39
PHRF1-206ENST00000534320 TTC27Q6P3X3 843 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 HEATR4Q86WZ0 1026 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 TFAP2BQ92481 460 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 TRIM45Q9H8W5 580 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-206ENST00000534320 CDHR5Q9HBB8 845 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 TMEM39AQ9NV64 488 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 PIAS1O75925 651 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 SERPIND1P05546 499 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 CCNB1P14635 433 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 ATP5C1P36542 298 aaKnown RBP17.5■□□□□ 0.39
PHRF1-206ENST00000534320 GALNTL6Q49A17 601 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 SPRYD7Q5W111 196 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 TMPRSS6Q8IU80 811 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 CDKN2BP42772 138 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 FLT3LGP49771 235 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 TBC1D19Q8N5T2 526 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 FTHL17Q9BXU8 183 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 FZD8Q9H461 694 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 SF3B1O75533 1304 aaKnown RBP eCLIP17.5■□□□□ 0.391e-8■■■■■ 140.7
PHRF1-206ENST00000534320 ATP6V1G2O95670 118 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 BRCC3P46736 316 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 NEPROQ6NW34 567 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 FAM162AQ96A26 154 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 TMEM237Q96Q45 408 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 RBBP8Q99708 897 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 VTI1BQ9UEU0 232 aa17.5■□□□□ 0.39
PHRF1-206ENST00000534320 UBDO15205 165 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 CLPTM1O96005 669 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 ZCCHC18P0CG32 403 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 NME5P56597 212 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 CACHD1Q5VU97 1274 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 RAP1GAP2Q684P5 730 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 BTBD10Q9BSF8 475 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 UXTQ9UBK9 157 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-206ENST00000534320 CICQ96RK0 1608 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-206ENST00000534320 AVILO75366 819 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 VNN1O95497 513 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 C22orf31O95567 290 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 ABCG1P45844 678 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 FAM95CA0A1B0GW59 222 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 PHGDHO43175 533 aaKnown RBP17.49■□□□□ 0.39
PHRF1-206ENST00000534320 PAX7P23759 505 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 CCDC142Q17RM4 750 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 CNDP1Q96KN2 507 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 TRPM3Q9HCF6 1732 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-206ENST00000534320 ADCY6O43306 1168 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 RAG1P15918 1043 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 TBL3Q12788 808 aaKnown RBP17.49■□□□□ 0.39
PHRF1-206ENST00000534320 PLD1Q13393 1074 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 GLT6D1Q7Z4J2 308 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 ECSITQ9BQ95 431 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 RNF208Q9H0X6 261 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 TAS2R13Q9NYV9 303 aa17.49■□□□□ 0.39
PHRF1-206ENST00000534320 TCRBV9S1A1TA0A576 114 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 STK25O00506 426 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 CBX6O95503 412 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 UNGP13051 313 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 AIF1P55008 147 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 WASHC5Q12768 1159 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 PDK4Q16654 411 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 DLK2Q6UY11 383 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 UNC5AQ6ZN44 842 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 RRM2BQ7LG56 351 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 C12orf50Q8NA57 414 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 VPS37AQ8NEZ2 397 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 NKD2Q969F2 451 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 MTERF3Q96E29 417 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 OTUB1Q96FW1 271 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 KLHL31Q9H511 634 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 FAM124BQ9H5Z6 455 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 DRD4P21917 467 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 PSEN1P49768 467 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 TUSC3Q13454 348 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 SPDYE7PQ495Y7 208 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 NANOGNBQ7Z5D8 188 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 PRCCQ92733 491 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 NMD3Q96D46 503 aaKnown RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 SAR1AQ9NR31 198 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 ARMCX1Q9P291 453 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 EVPLLA8MZ36 301 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 KPNA4O00629 521 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-206ENST00000534320 SP2Q02086 613 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 KRT72Q14CN4 511 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 CCDC149Q6ZUS6 474 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 DEFB107AQ8IZN7 70 aa17.48■□□□□ 0.39
PHRF1-206ENST00000534320 KCNK4Q9NYG8 393 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms