RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 USO1O60763 962 aaKnown RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 OAZ2O95190 189 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ADH4P08319 380 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 HLA-EP13747 358 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 JUPP14923 745 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 HMGA1P17096 107 aaKnown RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 GABRG2P18507 467 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CR2P20023 1033 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CYP3A7P24462 503 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 HSPA4P34932 840 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 AVPR1AP37288 418 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CSNK1EP49674 416 aaKnown RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CSRP3P50461 194 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 INHBCP55103 352 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 IL9RQ01113 521 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 KDSRQ06136 332 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 POU5F1BQ06416 359 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 BFSP1Q12934 665 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 DNAJC3Q13217 504 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 GPR17Q13304 367 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 DMP1Q13316 513 aaPredicted RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC14A1Q13336 389 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 HNRNPDQ14103 355 aaKnown RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 MTF1Q14872 753 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 NOLC1Q14978 699 aaKnown RBP eCLIP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 EPHA7Q15375 998 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 TESK1Q15569 626 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SMAD1Q15797 465 aaKnown RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 FXNQ16595 210 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ADCK5Q3MIX3 580 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 FBXO43Q4G163 708 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC39A12Q504Y0 691 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 XKR4Q5GH76 650 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CD276Q5ZPR3 534 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CREB3L3Q68CJ9 461 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 IGFL4Q6B9Z1 124 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 DENND5AQ6IQ26 1287 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CC2D1AQ6P1N0 951 aaPredicted RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 LAYNQ6UX15 382 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SYNE3Q6ZMZ3 975 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 OTUD6AQ7L8S5 288 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 GLRX5Q86SX6 157 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 C11orf74Q86VG3 221 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 MON1AQ86VX9 555 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CHD1LQ86WJ1 897 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 C4orf19Q8IY42 314 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ZCCHC9Q8N567 271 aaKnown RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ARL14EPQ8N8R7 260 aaPredicted RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 EXD3Q8N9H8 876 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 LEMD2Q8NC56 503 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 OR10T2Q8NGX3 314 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 PSMG2Q969U7 264 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ZG16BQ96DA0 208 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ZBTB45Q96K62 511 aaPredicted RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 AIFM3Q96NN9 605 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SEPT5Q99719 369 aaPredicted RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 HSD17B14Q9BPX1 270 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ANP32EQ9BTT0 268 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 GLT8D2Q9H1C3 349 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 ZSWIM4Q9H7M6 989 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 GPR27Q9NS67 375 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 TM7SF3Q9NS93 570 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 TDP1Q9NUW8 608 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 TMLHEQ9NVH6 421 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SIRPGQ9P1W8 387 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CALCOCO1Q9P1Z2 691 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 TUBGCP4Q9UGJ1 667 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 DDX25Q9UHL0 483 aaKnown RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 TPCN1Q9ULQ1 816 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 MMP17Q9ULZ9 603 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 OAZ3Q9UMX2 235 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 MAGED2Q9UNF1 606 aaPredicted RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 REXO2Q9Y3B8 237 aaKnown RBP3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 RAD54BQ9Y620 910 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 CELSR2Q9HCU4 2923 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SPAG17Q6Q759 2223 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 SHROOM3Q8TF72 1996 aa3.2□□□□□ -1.9
CHMP4A-208ENST00000534106 MYH6P13533 1939 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 MTCL1Q9Y4B5 1905 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 SPENQ96T58 3664 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 NF1P21359 2839 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 A0A1W2PQF6 199 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 ESYT2A0FGR8 921 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 C2orf78A6NCI8 922 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF839A8K0R7 811 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 M0QZQ0 153 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 ACKR2O00590 384 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 RRP8O43159 456 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 AP5Z1O43299 807 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 PRPF3O43395 683 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 BRINP1O60477 761 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 CUTAO60888 179 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 ALDH1A2O94788 518 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 KAT7O95251 611 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 C1SP09871 688 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 HARSP12081 509 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 POU3F2P20265 443 aaPredicted RBP3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 GRK2P25098 689 aa3.19□□□□□ -1.9
CHMP4A-208ENST00000534106 GNA11P29992 359 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms