RNA–Protein interactions for RNA: ENST00000533751.5

LONRF1-208, Transcript of LON peptidase N-terminal domain and ring finger 1, human

TSL 5 BASIC

Gene LONRF1, Length 3,043 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LONRF1-208	ENST00000533751	SFT2D3	Q587I9	215 aa		18.85	■□□□□ 0.61
LONRF1-208	ENST00000533751	C9orf131	Q5VYM1	1079 aa		18.85	■□□□□ 0.61
LONRF1-208	ENST00000533751	NMRAL1	Q9HBL8	299 aa		18.85	■□□□□ 0.61
LONRF1-208	ENST00000533751	WDR6	Q9NNW5	1121 aa	Known RBP	18.85	■□□□□ 0.61
LONRF1-208	ENST00000533751	TRIP12	Q14669	1992 aa	Predicted RBP	18.85	■□□□□ 0.61
LONRF1-208	ENST00000533751	GRK2	P25098	689 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	ZNF280D	Q6N043	979 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	DENND6A	Q8IWF6	608 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	EMID1	Q96A84	441 aa	Predicted RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	VPS39	Q96JC1	886 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	SENP8	Q96LD8	212 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	GAD1	Q99259	594 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	EIF2B3	Q9NR50	452 aa	Known RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	IGSF9	Q9P2J2	1179 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	OR12D3	Q9UGF7	316 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	JUN	P05412	331 aa	Known RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	EPHX2	P34913	555 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	CLCNKB	P51801	687 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	NAGLU	P54802	743 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	MFSD10	Q14728	455 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	PAFAH1B3	Q15102	231 aa	Known RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	SLC41A1	Q8IVJ1	513 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	KCTD4	Q8WVF5	259 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	USP13	Q92995	863 aa	Predicted RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	GTF2IRD1	Q9UHL9	959 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	RBM47	A0AV96	593 aa	Known RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	RRN3P2	A6NIE6	340 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	COX4I1	P13073	169 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	RPL34	P49207	117 aa	Known RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	NUDT2	P50583	147 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	CBLB	Q13191	982 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	USP10	Q14694	798 aa	Known RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	TRIP10	Q15642	601 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	PDCD2	Q16342	344 aa	Predicted RBP	18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	IL31	Q6EBC2	164 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	ZMIZ2	Q8NF64	920 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	BRI3BP	Q8WY22	251 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	FTHL17	Q9BXU8	183 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	CDH19	Q9H159	772 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	WDCP	Q9H6R7	721 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	POMP	Q9Y244	141 aa		18.84	■□□□□ 0.61
LONRF1-208	ENST00000533751	TMEM233	B4DJY2	109 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	RAG1	P15918	1043 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	MPP1	Q00013	466 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	GRIK3	Q13003	919 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	OLFML2B	Q68BL8	750 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	CYS1	Q717R9	158 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	CCNYL1	Q8N7R7	359 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	C3orf58	Q8NDZ4	430 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	IPMK	Q8NFU5	416 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	ABHD16B	Q9H3Z7	469 aa		18.83	■□□□□ 0.61
LONRF1-208	ENST00000533751	RNASEH1	O60930	286 aa	Known RBP	18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	LRIG2	O94898	1065 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	AQP4	P55087	323 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	PKNOX1	P55347	436 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	DAOA	P59103	153 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	KLF10	Q13118	480 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	TBCC	Q15814	346 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	TLK2	Q86UE8	772 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	CATSPER2	Q96P56	530 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	NAT9	Q9BTE0	207 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	DNAJC28	Q9NX36	388 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	RUVBL2	Q9Y230	463 aa	Known RBP	18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	SSX2IP	Q9Y2D8	614 aa		18.83	■□□□□ 0.6
LONRF1-208	ENST00000533751	TOMM70	O94826	608 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	LYN	P07948	512 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	TCN1	P20061	433 aa	Predicted RBP	18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	PNPLA4	P41247	253 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	GRAMD1B	Q3KR37	738 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	RPS27L	Q71UM5	84 aa	Known RBP	18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	DHDDS	Q86SQ9	333 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	FAM35A	Q86V20	835 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	SNX32	Q86XE0	403 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	RNF135	Q8IUD6	432 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	ZNF483	Q8TF39	744 aa	Predicted RBP	18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	GATA6	Q92908	595 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	NT5C3B	Q969T7	300 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	COLEC11	Q9BWP8	271 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	MIOS	Q9NXC5	875 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	CPA4	Q9UI42	421 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	PCDHB12	Q9Y5F1	795 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	CYP2B6	P20813	491 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	GRIA4	P48058	902 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	HARS2	P49590	506 aa	Known RBP	18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	CCL14	Q16627	93 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	NOMO2	Q5JPE7	1267 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	SNX31	Q8N9S9	440 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	GDPD5	Q8WTR4	605 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	CMTM5	Q96DZ9	223 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	ACE2	Q9BYF1	805 aa	Predicted RBP	18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	C1orf21	Q9H246	121 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	FAM124B	Q9H5Z6	455 aa	Predicted RBP	18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	TCF7L2	Q9NQB0	619 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	MAGEA13P	A6NCF6	341 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	STX16-NPEPL1	H3BU86	382 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	XPOT	O43592	962 aa	Known RBP	18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	BUD23	O43709	281 aa	Known RBP	18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	TRIM13	O60858	407 aa		18.82	■□□□□ 0.6
LONRF1-208	ENST00000533751	PIGN	O95427	931 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms