RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CCDC166P0CW27 439 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 YWHAQP27348 245 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CENPAP49450 140 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CLCN5P51795 746 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 MAMLD1Q13495 774 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 BMT2Q1RMZ1 405 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 TCHHL1Q5QJ38 904 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 TTC23Q5W5X9 447 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 STAG3L4Q8TBR4 150 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 KAT2BQ92831 832 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 WNT8BQ93098 351 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 RNFT2Q96EX2 444 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 QRFPRQ96P65 431 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 C1orf50Q9BV19 199 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 POLR1EQ9GZS1 481 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 POMKQ9H5K3 350 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 FANCEQ9HB96 536 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ATP13A1Q9HD20 1204 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 HMG20AQ9NP66 347 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ABCC13Q9NSE7 274 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 MORF4L1Q9UBU8 362 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ANAPC2Q9UJX6 822 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 DEPDC5O75140 1603 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ADGRB2O60241 1585 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 DCXO43602 365 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 PDE9AO76083 593 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CELF2O95319 508 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 PRLP01236 227 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 LTA4HP09960 611 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 RBL1P28749 1068 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 RTP1P59025 263 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 XIAPP98170 497 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 DDR1Q08345 913 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 GRIK3Q13003 919 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 INTS11Q5TA45 600 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 TRIQKQ629K1 86 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 MTSS1LQ765P7 747 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 NECAB2Q7Z6G3 386 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 OR8H2Q8N162 312 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CERKQ8TCT0 537 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 SPPL2AQ8TCT8 520 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 SEPHS2Q99611 448 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 APBA2Q99767 749 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ZCWPW1Q9H0M4 648 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 SERHL2Q9H4I8 314 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CDHR5Q9HBB8 845 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 SERHLQ9NQF3 203 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 UBP1Q9NZI7 540 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 MBD2Q9UBB5 411 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 LIMD1Q9UGP4 676 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 SNCAIPQ9Y6H5 919 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 GAKO14976 1311 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 PSMD12O00232 456 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 AREL1O15033 823 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ASNA1O43681 348 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 SEC22BO75396 215 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 PIGNO95427 931 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CBX6O95503 412 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CNPP09543 421 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 JAK1P23458 1154 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 DGKAP23743 735 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ATP5F1P24539 256 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 S100A3P33764 101 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 MAPK8P45983 427 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 TUFMP49411 452 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 POLR2LP62875 67 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 TAB1Q15750 504 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 MIIPQ5JXC2 388 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 NEPROQ6NW34 567 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CDC73Q6P1J9 531 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 GLT6D1Q7Z4J2 308 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 SLC44A2Q8IWA5 706 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ULK2Q8IYT8 1036 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 TCAIMQ8N3R3 496 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 CELF6Q96J87 481 aaKnown RBP7.12□□□□□ -1.27
CTNND1-236ENST00000533667 RNF145Q96MT1 663 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 TMEM237Q96Q45 408 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ZNF670Q9BS34 389 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 LRMDAQ9H2I8 198 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ABHD16BQ9H3Z7 469 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 DAPK2Q9UIK4 370 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 PLA2G4CQ9UP65 541 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 ROBO3Q96MS0 1386 aa7.12□□□□□ -1.27
CTNND1-236ENST00000533667 FAM47E-STBD1D6RA91 191 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 KLRC4O43908 158 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 PSMD10O75832 226 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 STAU1O95793 577 aaKnown RBP7.11□□□□□ -1.27
CTNND1-236ENST00000533667 PROCP04070 461 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 HPGDP15428 266 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 GRK4P32298 578 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 RPA3P35244 121 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-236ENST00000533667 MMP13P45452 471 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 IL2P60568 153 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 PAGE2BQ5JRK9 111 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 SPANXN2Q5MJ10 180 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 RSBN1Q5VWQ0 802 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-236ENST00000533667 DUPD1Q68J44 220 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 AAGABQ6PD74 315 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 BBS12Q6ZW61 710 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 CDH24Q86UP0 819 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms