RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 CBLBQ13191 982 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 HNRNPDQ14103 355 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 SPDYCQ5MJ68 293 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 ITPRIPL1Q6GPH6 555 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 SYCE2Q6PIF2 218 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 PPP1R21Q6ZMI0 780 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 CCDC117Q8IWD4 279 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 BBS7Q8IWZ6 715 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 ZNF567Q8N184 647 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 CELF5Q8N6W0 485 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 MCUQ8NE86 351 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 NSMCE1Q8WV22 266 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 MAML1Q92585 1016 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 PRCCQ92733 491 aaPredicted RBP12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 EXOC4Q96A65 974 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 OTUB2Q96DC9 234 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 HMCESQ96FZ2 354 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 TEKT5Q96M29 485 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 PPP1R2P1Q96PQ5 205 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 IL12RB2Q99665 862 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 FUT8Q9BYC5 575 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 KIF9Q9HAQ2 790 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 IGSF9Q9P2J2 1179 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 CCL26Q9Y258 94 aa12.54□□□□□ -0.4
TGFBR3-211ENST00000533370 ANAPC1Q9H1A4 1944 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 LINC01565O15544 149 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 PSMD3O43242 534 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 KDELR3O43731 214 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 PRAMEF11O60813 436 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 METTL18O95568 372 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 RHOCP08134 193 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 SGSHP51688 502 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 BASP1P80723 227 aaKnown RBP12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 SARNPP82979 210 aaKnown RBP12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 MLLT1Q03111 559 aaPredicted RBP12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 SEMA5AQ13591 1074 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 KCNJ11Q14654 390 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 ZNF77Q15935 545 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 TMCO4Q5TGY1 634 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 CES5AQ6NT32 575 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 ARHGAP36Q6ZRI8 547 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 TMC3Q7Z5M5 1100 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 RELL1Q8IUW5 271 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 DEPDC1BQ8WUY9 529 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 ING5Q8WYH8 240 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 ZNF599Q96NL3 588 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 TXLNGYQ9BZA5 131 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 PHACTR1Q9C0D0 580 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 VIPAS39Q9H9C1 493 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 KLHL8Q9P2G9 620 aaPredicted RBP12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 HPCAL4Q9UM19 191 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 MYO7AQ13402 2215 aa12.53□□□□□ -0.4
TGFBR3-211ENST00000533370 E7EVH7 732 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 H0Y626 953 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 J3KR12 359 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 MAP2K7O14733 419 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 EIF3HO15372 352 aaKnown RBP eCLIP12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ZBTB24O43167 697 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 PRAMEF12O95522 483 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 PEX11BO96011 259 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 TPSB2P20231 275 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ACVRL1P37023 503 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 IFNAR2P48551 515 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 PMS2P54278 862 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ARL4CP56559 192 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 TNK2Q07912 1038 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ZBTB17Q13105 803 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 USP4Q13107 963 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 PRPSAP1Q14558 356 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 CASP8Q14790 479 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 TPSAB1Q15661 275 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 CTC1Q2NKJ3 1217 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 MARC1Q5VT66 337 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ANKRD22Q5VYY1 191 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 RNF219Q5W0B1 726 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ALS2CLQ60I27 953 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 RNF43Q68DV7 783 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 IL31Q6EBC2 164 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ZNF354CQ86Y25 554 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ADGRG2Q8IZP9 1017 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 CARNMT1Q8N4J0 409 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 TAB3Q8N5C8 712 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 TEX26Q8N6G2 289 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 FIBINQ8TAL6 211 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 SMARCD2Q92925 531 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 SPON2Q9BUD6 331 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 ACE2Q9BYF1 805 aaPredicted RBP12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 S1PR5Q9H228 398 aa12.52□□□□□ -0.41
TGFBR3-211ENST00000533370 SP110Q9HB58 689 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms