RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TMEM253P0C7T8 217 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 VAV1P15498 845 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 GLDCP23378 1020 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 ETFBP38117 255 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 PLA2G2CQ5R387 149 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 DAB2IPQ5VWQ8 1189 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 H2AFVQ71UI9 128 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 CACUL1Q86Y37 369 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 GPR161Q8N6U8 529 aaKnown RBP20.94■□□□□ 0.94
CCS-208ENST00000533244 CTNNBL1Q8WYA6 563 aaPredicted RBP20.94■□□□□ 0.94
CCS-208ENST00000533244 BTBD6Q96KE9 485 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 MAGEH1Q9H213 219 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 ARRDC1-AS1Q9H2J1 176 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 NOL6Q9H6R4 1146 aaKnown RBP20.94■□□□□ 0.94
CCS-208ENST00000533244 SPTLC3Q9NUV7 552 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 WSB2Q9NYS7 404 aaPredicted RBP20.94■□□□□ 0.94
CCS-208ENST00000533244 UVRAGQ9P2Y5 699 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 DNAI1Q9UI46 699 aa20.94■□□□□ 0.94
CCS-208ENST00000533244 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 BCLAF3A2AJT9 711 aaKnown RBP20.93■□□□□ 0.94
CCS-208ENST00000533244 FGF10O15520 208 aaPredicted RBP20.93■□□□□ 0.94
CCS-208ENST00000533244 MAP3K13O43283 966 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 CREB3O43889 395 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 ACADMP11310 421 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 TCF4P15884 667 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 IL1R2P27930 398 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 CD6P30203 668 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 CLCN6P51797 869 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 SPEM2Q0P670 501 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 ELAVL3Q14576 367 aaKnown RBP20.93■□□□□ 0.94
CCS-208ENST00000533244 DLG2Q15700 870 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 TMEFF1Q8IYR6 380 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 ZNF564Q8TBZ8 553 aaPredicted RBP20.93■□□□□ 0.94
CCS-208ENST00000533244 ARHGEF2Q92974 986 aaKnown RBP20.93■□□□□ 0.94
CCS-208ENST00000533244 KCTD15Q96SI1 283 aaPredicted RBP20.93■□□□□ 0.94
CCS-208ENST00000533244 DHX35Q9H5Z1 703 aaKnown RBP20.93■□□□□ 0.94
CCS-208ENST00000533244 CATSPERBQ9H7T0 1116 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 ATP13A1Q9HD20 1204 aa20.93■□□□□ 0.94
CCS-208ENST00000533244 NUP205Q92621 2012 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 RAMP2O60895 175 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 OXTRP30559 389 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 ACVRL1P37023 503 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 PTGER3P43115 390 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 ARF5P84085 180 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 RPL6Q02878 288 aaKnown RBP20.92■□□□□ 0.94
CCS-208ENST00000533244 CSRP2Q16527 193 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 STK40Q8N2I9 435 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 TOE1Q96GM8 510 aaKnown RBP20.92■□□□□ 0.94
CCS-208ENST00000533244 SPON2Q9BUD6 331 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 SEMA4GQ9NTN9 838 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 SCML1Q9UN30 329 aa20.92■□□□□ 0.94
CCS-208ENST00000533244 CEP192Q8TEP8 1941 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 RALGAPA1Q6GYQ0 2036 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 K7ERQ8 282 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 MYO1FO00160 1098 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 CBX4O00257 560 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 CD160O95971 181 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 DNTTP04053 509 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 FECHP22830 423 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 MPLP40238 635 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 ZNF135P52742 658 aaPredicted RBP20.91■□□□□ 0.94
CCS-208ENST00000533244 TPI1P60174 286 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 SLC25A11Q02978 314 aaKnown RBP20.91■□□□□ 0.94
CCS-208ENST00000533244 SLC20A2Q08357 652 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 CST6Q15828 149 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 DPYSL2Q16555 572 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 BOLA3Q53S33 107 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 PEAR1Q5VY43 1037 aaPredicted RBP20.91■□□□□ 0.94
CCS-208ENST00000533244 RETSATQ6NUM9 610 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 LINGO4Q6UY18 593 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 UMODL1-AS1Q8N2C9 162 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 ZNF419Q96HQ0 510 aaPredicted RBP20.91■□□□□ 0.94
CCS-208ENST00000533244 ANP32EQ9BTT0 268 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 PABPC3Q9H361 631 aaKnown RBP20.91■□□□□ 0.94
CCS-208ENST00000533244 CTTNBP2NLQ9P2B4 639 aa20.91■□□□□ 0.94
CCS-208ENST00000533244 SMAD6O43541 496 aaKnown RBP20.9■□□□□ 0.94
CCS-208ENST00000533244 RNASEH1O60930 286 aaKnown RBP20.9■□□□□ 0.94
CCS-208ENST00000533244 HCAR3P49019 387 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 DHPSP49366 369 aaPredicted RBP20.9■□□□□ 0.94
CCS-208ENST00000533244 SERPINH1P50454 418 aaKnown RBP20.9■□□□□ 0.94
CCS-208ENST00000533244 YBEYP58557 167 aaPredicted RBP20.9■□□□□ 0.94
CCS-208ENST00000533244 CREB5Q02930 508 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 TTC31Q49AM3 519 aaPredicted RBP20.9■□□□□ 0.94
CCS-208ENST00000533244 ACCSLQ4AC99 568 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 IL31Q6EBC2 164 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 Q6ZVU0 165 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 USP30Q70CQ3 517 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 MMAAQ8IVH4 418 aaKnown RBP20.9■□□□□ 0.94
CCS-208ENST00000533244 SLC41A1Q8IVJ1 513 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 ATP11CQ8NB49 1132 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 TEKT4Q8WW24 435 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 PANX2Q96RD6 677 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 LCMT1Q9UIC8 334 aa20.9■□□□□ 0.94
CCS-208ENST00000533244 EEF2KO00418 725 aaKnown RBP20.89■□□□□ 0.94
CCS-208ENST00000533244 MCF2LO15068 1137 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 ALOX15BO15296 676 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 ZNF821O75541 412 aaPredicted RBP20.89■□□□□ 0.94
CCS-208ENST00000533244 PROSCO94903 275 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 ZNF806P0C7X5 589 aa20.89■□□□□ 0.94
CCS-208ENST00000533244 ZNF33AQ06730 810 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms