RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 KDM1BQ8NB78 822 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 HMCESQ96FZ2 354 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 HES6Q96HZ4 224 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 CELF6Q96J87 481 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 PSMB7Q99436 277 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 KLC2Q9H0B6 622 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 NOL6Q9H6R4 1146 aaKnown RBP11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 LRRC19Q9H756 370 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZDHHC4Q9NPG8 344 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 ETNK2Q9NVF9 386 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 SPATA6Q9NWH7 488 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 DLGAP2Q9P1A6 1054 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 SUN2Q9UH99 717 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 HCN2Q9UL51 889 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 PACSIN2Q9UNF0 486 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 SLC8A2Q9UPR5 921 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 STON1Q9Y6Q2 735 aa11.5□□□□□ -0.57
TRAPPC4-211ENST00000533012 TTC28Q96AY4 2481 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 CXorf51AA0A1B0GTR3 108 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 DFFAO00273 331 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 APOL1O14791 398 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 DDX3YO15523 660 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 SYNCRIPO60506 623 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 SNAP91O60641 907 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 PYGMP11217 842 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 KRT10P13645 584 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 WASP42768 502 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 CXCL12P48061 93 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 PAPOLAP51003 745 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 DNA2P51530 1060 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 GEMIN4P57678 1058 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 MTAPQ13126 283 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 SERINC3Q13530 473 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 GAS6Q14393 721 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 PPP2R5EQ16537 467 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 TAZQ16635 292 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 AFMIDQ63HM1 303 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 KAZNQ674X7 775 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 NCBP2-AS2Q69YL0 99 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 BZW1Q7L1Q6 419 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 SYT13Q7L8C5 426 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 LRRC49Q8IUZ0 686 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 PQLC3Q8N755 202 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 ATP11CQ8NB49 1132 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 DTWD2Q8NBA8 298 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 RPL10LQ96L21 214 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 MRGPRX3Q96LB0 322 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 ACOX2Q99424 681 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 KCND1Q9NSA2 647 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 CACNA2D2Q9NY47 1150 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 VPS51Q9UID3 782 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 MMP17Q9ULZ9 603 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 EFR3BQ9Y2G0 817 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 JRKLQ9Y4A0 524 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 MFHAS1Q9Y4C4 1052 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
TRAPPC4-211ENST00000533012 hCG_1818297A0A087WSY0 165 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZSCAN5CA6NGD5 496 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 USP27XA6NNY8 438 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 WASH3PC4AMC7 463 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 SGK1O00141 431 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 LAMTOR5O43504 91 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 CST8O60676 142 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZMPSTE24O75844 475 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 HOXB2P14652 356 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 MX2P20592 715 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 GLDCP23378 1020 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 IL12RB1P42701 662 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 CCR3P51677 355 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 CLCN6P51797 869 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 ARF5P84085 180 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 ENPP2Q13822 863 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 STARD3Q14849 445 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 LLGL1Q15334 1064 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 DNTTIP2Q5QJE6 756 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 SLC9A4Q6AI14 798 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 PKN3Q6P5Z2 889 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 LINGO4Q6UY18 593 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 METTL3Q86U44 580 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 C1orf210Q8IVY1 113 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 ARHGAP12Q8IWW6 846 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 NPWQ8N729 165 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 PLD5Q8N7P1 536 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 ALG3Q92685 438 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 GABRG3Q99928 467 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 LRFN3Q9BTN0 628 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 HEMGNQ9BXL5 484 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 OSBPL8Q9BZF1 889 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 TMEM245Q9H330 911 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 POLMQ9NP87 494 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 IPO11Q9UI26 975 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 SLCO3A1Q9UIG8 710 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 HS3ST2Q9Y278 367 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 HEY1Q9Y5J3 304 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 RAD54BQ9Y620 910 aa11.48□□□□□ -0.57
TRAPPC4-211ENST00000533012 MYOFQ9NZM1 2061 aa11.47□□□□□ -0.57
TRAPPC4-211ENST00000533012 TARSL2A2RTX5 802 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms