RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 NADK2Q4G0N4 442 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 DHFR2Q86XF0 187 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.57□□□□□ -0.88
BDNF-216ENST00000532997 SLC7A14Q8TBB6 771 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 CPB2Q96IY4 423 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 GMLQ99445 158 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 WDR83Q9BRX9 315 aaKnown RBP9.57□□□□□ -0.88
BDNF-216ENST00000532997 SETD4Q9NVD3 440 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.57□□□□□ -0.88
BDNF-216ENST00000532997 IGSF9Q9P2J2 1179 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 PACSIN3Q9UKS6 424 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 MRASO14807 208 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 FBXO21O94952 628 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 MPSTP25325 297 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 MATKP42679 507 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 AASDHQ4L235 1098 aaPredicted RBP9.57□□□□□ -0.88
BDNF-216ENST00000532997 RWDD4Q6NW29 188 aaKnown RBP9.57□□□□□ -0.88
BDNF-216ENST00000532997 PMF1Q6P1K2 205 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 SLC22A9Q8IVM8 553 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 UNC5BQ8IZJ1 945 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 LRRN4Q8WUT4 740 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 ITFG2Q969R8 447 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 MRPL46Q9H2W6 279 aaKnown RBP9.57□□□□□ -0.88
BDNF-216ENST00000532997 RHOJQ9H4E5 214 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 WDR55Q9H6Y2 383 aaPredicted RBP9.57□□□□□ -0.88
BDNF-216ENST00000532997 SUN2Q9UH99 717 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 GMEB1Q9Y692 573 aa9.57□□□□□ -0.88
BDNF-216ENST00000532997 SLX4Q8IY92 1834 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 A0A087X1B8 175 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 KCNK1O00180 336 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 BUD23O43709 281 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 TADA2AO75478 443 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ALDH1A2O94788 518 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ALDOAP04075 364 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 CPOXP36551 454 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 TAF6P49848 677 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 GEMP55040 296 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 INCA1Q0VD86 236 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 LAMC2Q13753 1193 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 LSM12Q3MHD2 195 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 PGM2L1Q6PCE3 622 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 KLHDC10Q6PID8 442 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 PATL1Q86TB9 770 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 TMEM110Q86TL2 294 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 KBTBD6Q86V97 674 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 RIOX2Q8IUF8 465 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 PHTF2Q8N3S3 785 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 C12orf29Q8N999 325 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 DDHD1Q8NEL9 900 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ING2Q9H160 280 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 RRN3Q9NYV6 651 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 HMGXB4Q9UGU5 601 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 LRRC37AA6NMS7 1700 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 SPDYE16A6NNV3 312 aaPredicted RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 PSMD12O00232 456 aaPredicted RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 TNPO2O14787 897 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 CLASP2O75122 1294 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 AP2A1O95782 977 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 TFEBP19484 476 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 PROZP22891 400 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 AVPR1AP37288 418 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 GLUD2P49448 558 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ILF2Q12905 390 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 LPIN1Q14693 890 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 SLC9B1Q4ZJI4 515 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 CELF3Q5SZQ8 465 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 FSTL4Q6MZW2 842 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 OLFML1Q6UWY5 402 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 SH2D5Q6ZV89 423 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ZNF410Q86VK4 478 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 CAMK1DQ8IU85 385 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 RNF135Q8IUD6 432 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ATPAF2Q8N5M1 289 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 LRRC52Q8N7C0 313 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 TRAPPC12Q8WVT3 735 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 CCDC138Q96M89 665 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ZNF696Q9H7X3 374 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 CLK4Q9HAZ1 481 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 SPAG4Q9NPE6 437 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 SEPT3Q9UH03 358 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 DERAQ9Y315 318 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 PAPSS1O43252 624 aaPredicted RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 MFSD11O43934 449 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 RGS20O76081 388 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ATP5F1P24539 256 aaPredicted RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 EEF1DP29692 281 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 CD151P48509 253 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 THOP1P52888 689 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 AIF1P55008 147 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 OCA2Q04671 838 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 ITKQ08881 620 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 NIPAL4Q0D2K0 466 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 PEX6Q13608 980 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 NRF1Q16656 503 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 DALRD3Q5D0E6 543 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 CLVS1Q8IUQ0 354 aaPredicted RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 SNRNP27Q8WVK2 155 aaKnown RBP9.56□□□□□ -0.88
BDNF-216ENST00000532997 NCSTNQ92542 709 aa9.56□□□□□ -0.88
BDNF-216ENST00000532997 TOP1MTQ969P6 601 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms