RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 DNAI1Q9UI46 699 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 SAR1BQ9Y6B6 198 aa12.83□□□□□ -0.36
COPB1-208ENST00000532088 A0A0A0MRY4 1105 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 FANCGO15287 622 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 NCAM2O15394 837 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 GFRA3O60609 400 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 RAMP2O60895 175 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 TULP3O75386 442 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 RHOCP08134 193 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 CISD3P0C7P0 127 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 AMPD1P23109 780 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 OPRD1P41143 372 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 IRAK1P51617 712 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 PRKCQQ04759 706 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 ZNF33AQ06730 810 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 KLF1Q13351 362 aaPredicted RBP12.82□□□□□ -0.36
COPB1-208ENST00000532088 TUBB2AQ13885 445 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 ANKS1BQ7Z6G8 1248 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 SLC13A5Q86YT5 568 aaPredicted RBP12.82□□□□□ -0.36
COPB1-208ENST00000532088 RFX6Q8HWS3 928 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 PHTF2Q8N3S3 785 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 CARNMT1Q8N4J0 409 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 PLD5Q8N7P1 536 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 ACTRT1Q8TDG2 376 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 TUBB2BQ9BVA1 445 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 BRD8Q9H0E9 1235 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 DNAJC17Q9NVM6 304 aaKnown RBP12.82□□□□□ -0.36
COPB1-208ENST00000532088 DEC1Q9P2X7 70 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 OR51B4Q9Y5P0 310 aa12.82□□□□□ -0.36
COPB1-208ENST00000532088 KIAA1549LQ6ZVL6 1849 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 SPECC1L-ADORA2AF8WAN1 911 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 APOC4-APOC2K7ER74 178 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 MAN2B1O00754 1011 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 TIMM44O43615 452 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 NARSO43776 548 aaKnown RBP12.81□□□□□ -0.36
COPB1-208ENST00000532088 CST8O60676 142 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 APOC2P02655 101 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 MX2P20592 715 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 HLA-FP30511 346 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 DGKGP49619 791 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 DNA2P51530 1060 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 GNA12Q03113 381 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 ZNF211Q13398 564 aaPredicted RBP12.81□□□□□ -0.36
COPB1-208ENST00000532088 EIF4HQ15056 248 aaKnown RBP12.81□□□□□ -0.36
COPB1-208ENST00000532088 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 GRAMD4Q6IC98 578 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 TFAP2DQ7Z6R9 452 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 CIR1Q86X95 450 aaPredicted RBP12.81□□□□□ -0.36
COPB1-208ENST00000532088 ARHGAP12Q8IWW6 846 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 AHI1Q8N157 1196 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 FATE1Q969F0 183 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 CHFRQ96EP1 664 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 PNKPQ96T60 521 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 ACE2Q9BYF1 805 aaPredicted RBP12.81□□□□□ -0.36
COPB1-208ENST00000532088 ETNK2Q9NVF9 386 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 PLK2Q9NYY3 685 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 WASF2Q9Y6W5 498 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 PIAS3Q9Y6X2 628 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 TICRRQ7Z2Z1 1910 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 CHD5Q8TDI0 1954 aa12.81□□□□□ -0.36
COPB1-208ENST00000532088 PRUNE2Q8WUY3 3088 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 ZSCAN5CA6NGD5 496 aaPredicted RBP12.8□□□□□ -0.36
COPB1-208ENST00000532088 ARHGAP42A6NI28 874 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 CEP104O60308 925 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 ASLP04424 464 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 PABPC1P11940 636 aaKnown RBP12.8□□□□□ -0.36
COPB1-208ENST00000532088 KRT10P13645 584 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 DRD1P21728 446 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 GRIA2P42262 883 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 SULT2A1Q06520 285 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 GALNT2Q10471 571 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 LMAN2Q12907 356 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 XRCC4Q13426 336 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 LAPTM4AQ15012 233 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 POLD3Q15054 466 aaPredicted RBP12.8□□□□□ -0.36
COPB1-208ENST00000532088 MLF2Q15773 248 aaPredicted RBP12.8□□□□□ -0.36
COPB1-208ENST00000532088 PLEKHG6Q3KR16 790 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 FSCBQ5H9T9 825 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 KAZNQ674X7 775 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 C12orf40Q86WS4 652 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 NPWQ8N729 165 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 TERB1Q8NA31 727 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 DCAF4L2Q8NA75 395 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 KIF18AQ8NI77 898 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 CCDC26Q8TAB7 109 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 WFDC5Q8TCV5 224 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 P3H4Q92791 437 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 ARHGEF2Q92974 986 aaKnown RBP12.8□□□□□ -0.36
COPB1-208ENST00000532088 TTC17Q96AE7 1141 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 ACDQ96AP0 544 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 ALG14Q96F25 216 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 SHDQ96IW2 340 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 PSMB7Q99436 277 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 FEM1AQ9BSK4 669 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 C2orf49Q9BVC5 232 aaPredicted RBP12.8□□□□□ -0.36
COPB1-208ENST00000532088 NOL6Q9H6R4 1146 aaKnown RBP12.8□□□□□ -0.36
COPB1-208ENST00000532088 HOMER3Q9NSC5 361 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 NDFIP2Q9NV92 336 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 DTLQ9NZJ0 730 aa12.8□□□□□ -0.36
COPB1-208ENST00000532088 GGA2Q9UJY4 613 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms