RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 DPF1Q92782 380 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 MPHOSPH8Q99549 860 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 CD209Q9NNX6 404 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 MGAT4CQ9UBM8 478 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 SCAF8Q9UPN6 1271 aaKnown RBP5.38□□□□□ -1.55
CSDE1-212ENST00000529046 ZNF804BA4D1E1 1349 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 SCN9AQ15858 1988 aa5.38□□□□□ -1.55
CSDE1-212ENST00000529046 PAPPA2Q9BXP8 1791 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 TCRBV5S1A1TA0A578 114 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 ANKRD18BA2A2Z9 1011 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 TARM1B6A8C7 271 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 INO80B-WBP1J3KQ70 363 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 J3KTA2 159 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 ZSCAN9O15535 394 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-212ENST00000529046 JTBO76095 146 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 FPR3P25089 353 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 GRK6P43250 576 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 POLE2P56282 527 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 CFHR3Q02985 330 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 CHRNDQ07001 517 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 SLC10A2Q12908 348 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-212ENST00000529046 TMEM196Q5HYL7 178 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 PCID2Q5JVF3 399 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 KIAA1614Q5VZ46 1190 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 DENND2CQ68D51 928 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 DLK2Q6UY11 383 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 G2E3Q7L622 706 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 SLC29A4Q7RTT9 530 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 ARMC9Q7Z3E5 817 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 CTU1Q7Z7A3 348 aaKnown RBP5.37□□□□□ -1.55
CSDE1-212ENST00000529046 GATAD2AQ86YP4 633 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 APOBEC3FQ8IUX4 373 aaKnown RBP5.37□□□□□ -1.55
CSDE1-212ENST00000529046 TERB1Q8NA31 727 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 GRAMD1AQ96CP6 724 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 VPS50Q96JG6 964 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 MACROD1Q9BQ69 325 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 TMEM120AQ9BXJ8 343 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 MAGEH1Q9H213 219 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 PRDM8Q9NQV8 689 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 SNX15Q9NRS6 342 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 VPS45Q9NRW7 570 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 LPAR3Q9UBY5 353 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 FZD4Q9ULV1 537 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 RIPOR2Q9Y4F9 1068 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 UTYO14607 1347 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 FANCIQ9NVI1 1328 aa5.37□□□□□ -1.55
CSDE1-212ENST00000529046 CACNA1FO60840 1977 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 LOC105369274A0A096LPK9 316 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 LOC102723532A0A0G2JNH3 316 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 FAM90A18PA6NE21 464 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 FAM90A16PA6NEW6 464 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 FAM90A9PA6NNJ1 464 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 FAM90A5PA8MXJ8 464 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 M0QZQ0 153 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 CES2O00748 559 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 TNFRSF6BO95407 300 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 FAM90A15PP0C7V4 464 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 FAM90A14PP0C7W9 464 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 GPC5P78333 572 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 HOXA4Q00056 320 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-212ENST00000529046 TFF2Q03403 129 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 SREBF2Q12772 1141 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 GRM4Q14833 912 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 TMEM119Q4V9L6 283 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 CCDC38Q502W7 563 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 CCDC184Q52MB2 194 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 L1TD1Q5T7N2 865 aaKnown RBP5.36□□□□□ -1.55
CSDE1-212ENST00000529046 TRIM72Q6ZMU5 477 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 NRSN1Q8IZ57 195 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 OR4N4Q8N0Y3 316 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 C12orf76Q8N812 135 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-212ENST00000529046 SEMA6DQ8NFY4 1073 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 OTUD7AQ8TE49 926 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-212ENST00000529046 MORC4Q8TE76 937 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 DDB2Q92466 427 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 PRPF18Q99633 342 aaKnown RBP5.36□□□□□ -1.55
CSDE1-212ENST00000529046 DDX23Q9BUQ8 820 aaKnown RBP5.36□□□□□ -1.55
CSDE1-212ENST00000529046 DACT1Q9NYF0 836 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 SH3BP4Q9P0V3 963 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 ASTN2O75129 1339 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-212ENST00000529046 FAM205AQ6ZU69 1335 aa5.36□□□□□ -1.55
CSDE1-212ENST00000529046 ZNF521Q96K83 1311 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 KIF16BQ96L93 1317 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 PNMA6EA0A0J9YXQ4 647 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 DNAJC9-AS1A6NH13 148 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 UBE2Q2LH0YL09 131 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 GRM8O00222 908 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 ANP32CO43423 234 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 PDE8BO95263 885 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 MT-CO3P00414 261 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 SRGAP2BP0DMP2 458 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 ALDH18A1P54886 795 aaKnown RBP5.35□□□□□ -1.55
CSDE1-212ENST00000529046 TRIM14Q14142 442 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 DLGAP5Q15398 846 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 FAM187BQ17R55 369 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 CCDC57Q2TAC2 916 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 SUPT20HL1Q3ZLR7 823 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 C4orf46Q504U0 113 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 CCDC144NLQ6NUI1 221 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 CCDC174Q6PII3 467 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms