RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 ZNF18P17022 549 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 TGM2P21980 687 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CMA1P23946 247 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 TBXAS1P24557 533 aaPredicted RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 AKT2P31751 481 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 RPL34P49207 117 aaKnown RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 HNRNPKP61978 463 aaKnown RBP eCLIP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 SRSF1Q07955 248 aaKnown RBP eCLIP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 DLG2Q15700 870 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 ZNF284Q2VY69 593 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 ACCSLQ4AC99 568 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CBWD6Q4V339 395 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CBWD3Q5JTY5 395 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CBWD5Q5RIA9 395 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 KIAA1614Q5VZ46 1190 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 RAP1GAP2Q684P5 730 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CCDC81Q6ZN84 652 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 ABI3BPQ7Z7G0 1075 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CCAR2Q8N163 923 aaKnown RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 OR13H1Q8NG92 308 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 IFI44Q8TCB0 444 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 ALG14Q96F25 216 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 PRMT1Q99873 361 aaKnown RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 CSNK1G3Q9Y6M4 447 aa12.65□□□□□ -0.38
SRPRA-202ENST00000527817 UBR5O95071 2799 aaPredicted RBP12.65□□□□□ -0.38
SRPRA-202ENST00000527817 RP1P56715 2156 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 TLN1Q9Y490 2541 aaKnown RBP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 KIF26BQ2KJY2 2108 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 A0A1B0GVL5 298 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 A0A1W2PQU0 124 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 F5H5T6 163 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 SART1O43290 800 aaKnown RBP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 APOEP02649 317 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 HNRNPA2B1P22626 353 aaKnown RBP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 DPYDQ12882 1025 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 EIF4EBP2Q13542 120 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 FOXD4L6Q3SYB3 417 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 C3orf38Q5JPI3 329 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 PIP5KL1Q5T9C9 394 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 TTC39BQ5VTQ0 682 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 SYPL2Q5VXT5 272 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 TMEM270Q6UE05 265 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 FOXD4L3Q6VB84 417 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 HORMAD1Q86X24 394 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 CHSY1Q86X52 802 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 ATP6V0D2Q8N8Y2 350 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 KLK6Q92876 244 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 ATXN7L3BQ96GX2 97 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 ZSWIM1Q9BR11 485 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 FEM1AQ9BSK4 669 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 CALN1Q9BXU9 219 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 MIS12Q9H081 205 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.64□□□□□ -0.39
SRPRA-202ENST00000527817 NCKIPSDQ9NZQ3 722 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 SLC12A6Q9UHW9 1150 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 SLC25A13Q9UJS0 675 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 HPSEQ9Y251 543 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 ENTPD2Q9Y5L3 495 aa12.64□□□□□ -0.39
SRPRA-202ENST00000527817 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 TRPM6Q9BX84 2022 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 EME2A4GXA9 379 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 TCAF2A6NFQ2 919 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 KCNU1A8MYU2 1149 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 M0QYV0 167 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 RNF225M0QZC1 329 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 TCEA3O75764 348 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 ZSCAN22P10073 491 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 PFKFB1P16118 471 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 PRLRP16471 622 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 FOXD4L5Q5VV16 416 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 CXorf57Q6NSI4 855 aaKnown RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 ZCCHC8Q6NZY4 707 aaKnown RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 Q6ZSR6 202 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 CLEC14AQ86T13 490 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 TAC4Q86UU9 113 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 SLC22A18ASQ8N1D0 253 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 ARL14Q8N4G2 192 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 SH2D3CQ8N5H7 860 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 EXD3Q8N9H8 876 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 TMIEQ8NEW7 156 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 FOXD4L4Q8WXT5 416 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 FAM149B1Q96BN6 582 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 BMFQ96LC9 184 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 NOX5Q96PH1 765 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 CCNL2Q96S94 520 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 MYOCQ99972 504 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 TRIM62Q9BVG3 475 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 FAM117AQ9C073 453 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 CAAP1Q9H8G2 361 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 GPR27Q9NS67 375 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 DNAJC28Q9NX36 388 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 SALL4Q9UJQ4 1053 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
SRPRA-202ENST00000527817 OR51B4Q9Y5P0 310 aa12.63□□□□□ -0.39
SRPRA-202ENST00000527817 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.62□□□□□ -0.39
SRPRA-202ENST00000527817 CPED1A4D0V7 1026 aa12.62□□□□□ -0.39
SRPRA-202ENST00000527817 A6NNZ2 444 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms