RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ANTXR1Q9H6X2 564 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 TIMMDC1Q9NPL8 285 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 MIEF1Q9NQG6 463 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CLIC5Q9NZA1 410 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 GNPTGQ9UJJ9 305 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 PVALEFA0A1B0GWK0 134 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CHURC1-FNTBB4DL54 471 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SMIM22K7EJ46 135 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 PRPF3O43395 683 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 TSPAN1O60635 241 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 USP12O75317 370 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 NADKO95544 446 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 HLA-DQA2P01906 255 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 NR3C2P08235 984 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ADORA2BP29275 332 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CAV3P56539 151 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 LSM3P62310 102 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 HERVK_113P62684 666 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 KCNMA1Q12791 1236 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 PKN1Q16512 942 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SMU1Q2TAY7 513 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SAMD4BQ5PRF9 694 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 DACT2Q5SW24 774 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 C1orf94Q6P1W5 598 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 DDX53Q86TM3 631 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CCNJLQ8IV13 435 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SLC25A41Q8N5S1 370 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 TSPYL6Q8N831 410 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SNIP1Q8TAD8 396 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 GPR63Q9BZJ6 419 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 GANQ9H2C0 597 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF451Q9Y4E5 1061 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ZSCAN5CA6NGD5 496 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 M0R036 132 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 PEX14O75381 377 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 IFNA7P01567 189 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ATP5BP06576 529 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 FAM228BP0C875 321 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 TKTP29401 623 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CDC25AP30304 524 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ADSLP30566 484 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RGS6P49758 472 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RGS7P49802 495 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CYP24A1Q07973 514 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF234Q14588 700 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 MRNIPQ6NTE8 343 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ARMC8Q8IUR7 673 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 GPALPP1Q8IXQ4 340 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 MCFD2Q8NI22 146 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ITFG1Q8TB96 612 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ZKSCAN4Q969J2 545 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 PABPC5Q96DU9 382 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ZSCAN5AQ9BUG6 496 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 TDRD1Q9BXT4 1180 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 DPY30Q9C005 99 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 TRIM9Q9C026 710 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF350Q9GZX5 532 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CCNB1IP1Q9NPC3 277 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 EVA1BQ9NVM1 165 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 NCKIPSDQ9NZQ3 722 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 PRKAG3Q9UGI9 489 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CORO1CQ9ULV4 474 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RABL2BQ9UNT1 228 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 WDR37Q9Y2I8 494 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 NDUFAF1Q9Y375 327 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 DYRK1BQ9Y463 629 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 MOXD2PA6NHM9 499 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RRN3P2A6NIE6 340 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SLC33A1O00400 549 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RAD51CO43502 376 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 KCNH1O95259 989 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 FGAP02671 866 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RBP1P09455 135 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 IL1R1P14778 569 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 MAGEA8P43361 318 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 IDH2P48735 452 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SLC9A3P48764 834 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SULT1E1P49888 294 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ARHGAP15Q53QZ3 475 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 GRHL2Q6ISB3 625 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 CHRDL2Q6WN34 429 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RBM44Q6ZP01 1051 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF589Q86UQ0 364 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 PEX5LQ8IYB4 626 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 SRFBP1Q8NEF9 429 aaKnown RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 OR52L1Q8NGH7 329 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 NEK7Q8TDX7 302 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 EZH1Q92800 747 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 TPD52L3Q96J77 140 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 EHD4Q9H223 541 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 EXD2Q9NVH0 621 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 RABL2AQ9UBK7 228 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-216ENST00000527467 DMTF1Q9Y222 760 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 LYVE1Q9Y5Y7 322 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 NDUFB9Q9Y6M9 179 aa7.35□□□□□ -1.23
CTNND1-216ENST00000527467 ZNF536O15090 1300 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 A0A0D9SFI3 127 aa7.34□□□□□ -1.23
CTNND1-216ENST00000527467 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-216ENST00000527467 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms