RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 GPR78Q96P69 363 aa4.3□□□□□ -1.72
CD44-219ENST00000525685 PIGSQ96S52 555 aa4.3□□□□□ -1.72
CD44-219ENST00000525685 ISCA1Q9BUE6 129 aa4.3□□□□□ -1.72
CD44-219ENST00000525685 PDE11AQ9HCR9 933 aa4.3□□□□□ -1.72
CD44-219ENST00000525685 TMLHEQ9NVH6 421 aa4.3□□□□□ -1.72
CD44-219ENST00000525685 GAR1Q9NY12 217 aaKnown RBP4.3□□□□□ -1.72
CD44-219ENST00000525685 SLC25A13Q9UJS0 675 aa4.3□□□□□ -1.72
CD44-219ENST00000525685 B3GNT3Q9Y2A9 372 aa4.3□□□□□ -1.72
CD44-219ENST00000525685 RRP7AQ9Y3A4 280 aaKnown RBP4.3□□□□□ -1.72
CD44-219ENST00000525685 RGPD8O14715 1765 aaPredicted RBP4.3□□□□□ -1.72
CD44-219ENST00000525685 WDR17Q8IZU2 1322 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 GXYLT2A0PJZ3 443 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 MBD3L5A6NJ08 208 aaPredicted RBP4.29□□□□□ -1.72
CD44-219ENST00000525685 INPPL1O15357 1258 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 HSD3B1P14060 373 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 AKR1A1P14550 325 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 HSPA1LP34931 641 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 STAT6P42226 847 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 MAPK9P45984 424 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 PNLIPRP1P54315 467 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 SLC37A1P57057 533 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 GHRHRQ02643 423 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 GAB1Q13480 694 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 TTC22Q5TAA0 569 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 DGAT2L7PQ6IED9 249 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 ANO7Q6IWH7 933 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 ASB12Q8WXK4 309 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 KCNJ9Q92806 393 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 CUL5Q93034 780 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 FAM118BQ9BPY3 351 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 HTATIP2Q9BUP3 242 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 DDX23Q9BUQ8 820 aaKnown RBP4.29□□□□□ -1.72
CD44-219ENST00000525685 KCNK9Q9NPC2 374 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 LUZP4Q9P127 313 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 DGKBQ9Y6T7 804 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 ANKARQ7Z5J8 1434 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 SHPRHQ149N8 1683 aa4.29□□□□□ -1.72
CD44-219ENST00000525685 EIF3AQ14152 1382 aaKnown RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 MED1Q15648 1581 aaPredicted RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 CENPJQ9HC77 1338 aaPredicted RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 SMIM35A0A1B0GVV1 85 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 PRYO14603 147 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 HNRNPRO43390 633 aaKnown RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 MOSPD3O75425 235 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 CYP3A4P08684 503 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 ALDOCP09972 364 aaKnown RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 ATF7P17544 494 aaPredicted RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 ACTR2P61160 394 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 YPEL5P62699 121 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 GOLGA8FQ08AF8 430 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 STIM1Q13586 685 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 SLC12A1Q13621 1099 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 SLC2A7Q6PXP3 512 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 ZNF813Q6ZN06 617 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 BRINP3Q76B58 766 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 ADGRF4Q8IZF3 695 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 ANKRD44Q8N8A2 993 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 C9orf106Q8NAJ2 232 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 CEP70Q8NHQ1 597 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 CLEC4CQ8WTT0 213 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 THAP4Q8WY91 577 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 TRMT61AQ96FX7 289 aaKnown RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 RBM17Q96I25 401 aaKnown RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 KAZALD1Q96I82 304 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 ZNF845Q96IR2 970 aaPredicted RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 COG8Q96MW5 612 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 PYM1Q9BRP8 204 aaKnown RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 PRSS22Q9GZN4 317 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 OSBPL5Q9H0X9 879 aaPredicted RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 PDGFCQ9NRA1 345 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD44-219ENST00000525685 TRPM3Q9HCF6 1732 aaPredicted RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 PXDNQ92626 1479 aa4.28□□□□□ -1.72
CD44-219ENST00000525685 COL22A1Q8NFW1 1626 aaPredicted RBP4.28□□□□□ -1.72
CD44-219ENST00000525685 EMSYQ7Z589 1322 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 CYP2D7A0A087X1C5 515 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 DPPA5A6NC42 116 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 ANP32CO43423 234 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 CREB3O43889 395 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 NFATC1O95644 943 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 TOP3BO95985 862 aaKnown RBP4.27□□□□□ -1.73
CD44-219ENST00000525685 CPA1P15085 419 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 VEGFAP15692 232 aaPredicted RBP4.27□□□□□ -1.73
CD44-219ENST00000525685 ST6GAL1P15907 406 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 PTGER1P34995 402 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 ARHGAP25P42331 645 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 CPA2P48052 419 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 MCM2P49736 904 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 CDK7P50613 346 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 FAM3BP58499 235 aaPredicted RBP4.27□□□□□ -1.73
CD44-219ENST00000525685 SHC2P98077 582 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 ALKBH1Q13686 389 aaKnown RBP4.27□□□□□ -1.73
CD44-219ENST00000525685 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
CD44-219ENST00000525685 LRRC24Q50LG9 513 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 RUNDC3AQ59EK9 446 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 LIPMQ5VYY2 423 aa4.27□□□□□ -1.73
CD44-219ENST00000525685 CERS3Q8IU89 383 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms