RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PDIA6Q15084 440 aa13.88□□□□□ -0.19
LRRK1-202ENST00000525284 SLC9A4Q6AI14 798 aa13.88□□□□□ -0.19
LRRK1-202ENST00000525284 POF1BQ8WVV4 589 aa13.88□□□□□ -0.19
LRRK1-202ENST00000525284 C11orf24Q96F05 449 aaPredicted RBP13.88□□□□□ -0.19
LRRK1-202ENST00000525284 GPER1Q99527 375 aa13.88□□□□□ -0.19
LRRK1-202ENST00000525284 UBQLN1Q9UMX0 589 aaKnown RBP13.88□□□□□ -0.19
LRRK1-202ENST00000525284 KIF1BO60333 1816 aa13.88□□□□□ -0.19
LRRK1-202ENST00000525284 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 KBTBD13C9JR72 458 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 SLC25A12O75746 678 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 ALOX5P09917 674 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 NTSP30990 170 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 CD151P48509 253 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 DOK6Q6PKX4 331 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 HNRNPLLQ8WVV9 542 aaKnown RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 FBXO32Q969P5 355 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 MTIF3Q9H2K0 278 aaKnown RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 THAP1Q9NVV9 213 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 TMCO1Q9UM00 188 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 NADKO95544 446 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 GYPCP04921 128 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 THRBP10828 461 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 PTPN3P26045 913 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 SEPHS1P49903 392 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 CDC42EP1Q00587 391 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 MGAT5Q09328 741 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 GRAPQ13588 217 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 OGFRL1Q5TC84 451 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 GRAPLQ8TC17 118 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 HPF1Q9NWY4 346 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 ZSCAN5CA6NGD5 496 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 SGPL1O95470 568 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 GRK5P34947 590 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 WDR93Q6P2C0 686 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 SLCO6A1Q86UG4 719 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 HGH1Q9BTY7 390 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 ZSCAN5AQ9BUG6 496 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 FRMD8P1Q9BZ68 369 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 OAS3Q9Y6K5 1087 aaKnown RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 A0A1W2PQ72 361 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 PLEKP08567 350 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 FAM187BQ17R55 369 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 PLET1Q6UQ28 207 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 STOX1Q6ZVD7 989 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 ATG9AQ7Z3C6 839 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 NAT14Q8WUY8 206 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 TMEM51Q9NW97 253 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 DMGDHQ9UI17 866 aaKnown RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 PRELID1Q9Y255 219 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 WDR27A2RRH5 827 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 CYP4B1P13584 511 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 YY1P25490 414 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 IL6STP40189 918 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 NOL9Q5SY16 702 aaKnown RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 KCNV1Q6PIU1 500 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.87□□□□□ -0.19
LRRK1-202ENST00000525284 SPERTQ8NA61 448 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 ZNF285Q96NJ3 590 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 MED28Q9H204 178 aa13.87□□□□□ -0.19
LRRK1-202ENST00000525284 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 TAF6P49848 677 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 EFEMP1Q12805 493 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 FRG1Q14331 258 aaKnown RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 FAM98AQ8NCA5 519 aaKnown RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 MMADHCQ9H3L0 296 aaPredicted RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 SLC24A2Q9UI40 661 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 ARL5CA6NH57 179 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 BTN3A1O00481 513 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 ODC1P11926 461 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 BMP7P18075 431 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 ALG11Q2TAA5 492 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 RAD51AP1Q96B01 352 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 PDLIM2Q96JY6 352 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 AIF1LQ9BQI0 150 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 SLC25A23Q9BV35 468 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 A0A1W2PQJ5 194 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 MYMKA6NI61 221 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 MCIDASD6RGH6 385 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 ARFIP1P53367 373 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 XIAPP98170 497 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 PDK2Q15119 407 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 GRTP1Q5TC63 336 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 EFCAB12Q6NXP0 572 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 OR5T3Q8NGG3 340 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 PPP1R13LQ8WUF5 828 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 TNFAIP8L1Q8WVP5 186 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 GFM1Q96RP9 751 aaKnown RBP13.86□□□□□ -0.19
LRRK1-202ENST00000525284 FUT8Q9BYC5 575 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 PACSIN3Q9UKS6 424 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 A0A075B6Q4 140 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 VPS4BO75351 444 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 CBWD6Q4V339 395 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 SEZ6Q53EL9 994 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 UBE2Q1Q7Z7E8 422 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 CHCHD6Q9BRQ6 235 aa13.86□□□□□ -0.19
LRRK1-202ENST00000525284 CBWD1Q9BRT8 395 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms