RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PPM1JQ5JR12 505 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 C6orf118Q5T5N4 469 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 ACBD5Q5T8D3 534 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 Q6ZVU0 165 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 HDDC3Q8N4P3 179 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 ZCCHC9Q8N567 271 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 SH2D3CQ8N5H7 860 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 AADATQ8N5Z0 425 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 ATP11CQ8NB49 1132 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 DNASE2BQ8WZ79 361 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 OMDQ99983 421 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 EDEM3Q9BZQ6 932 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 OSBPL2Q9H1P3 480 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 NEUROG2Q9H2A3 272 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 NDFIP2Q9NV92 336 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 ZNF212Q9UDV6 495 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 SLCO1B1Q9Y6L6 691 aa13.17□□□□□ -0.3
TRAPPC4-205ENST00000525079 DOCK4Q8N1I0 1966 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 GON4LQ3T8J9 2241 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 ILVBLA1L0T0 632 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 CBX4O00257 560 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 SMAD6O43541 496 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 LRIG2O94898 1065 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 GNSP15586 552 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 ATXN3P54252 364 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 TDRD12Q587J7 1177 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 FIGNQ5HY92 759 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 MANEALQ5VSG8 457 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 DAB2IPQ5VWQ8 1189 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 SLFN11Q7Z7L1 901 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 BIRC7Q96CA5 298 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 CNPY3Q9BT09 278 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 C2orf49Q9BVC5 232 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 SGK2Q9HBY8 427 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 ATP13A1Q9HD20 1204 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 MYO1AQ9UBC5 1043 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 PPARGC1AQ9UBK2 798 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 SARDHQ9UL12 918 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 SCML1Q9UN30 329 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 ACTL7AQ9Y615 435 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 NUMA1Q14980 2115 aa13.16□□□□□ -0.3
TRAPPC4-205ENST00000525079 A0A1B0GTW7 788 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 ARHGAP33O14559 1287 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 RTN2O75298 545 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 ADH1BP00325 375 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 RHOQP17081 205 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 C5AR1P21730 350 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 PSMA2P25787 234 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 ACVRL1P37023 503 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 GALCP54803 685 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 NRG1Q02297 640 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 GNA12Q03113 381 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 ELAVL3Q14576 367 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 PLEKHA7Q6IQ23 1121 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 USP30Q70CQ3 517 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 RABEPKQ7Z6M1 372 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 DCAF4L2Q8NA75 395 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 OR8D1Q8WZ84 308 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 NTAN1Q96AB6 310 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 ZNF653Q96CK0 615 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 VCPIP1Q96JH7 1222 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 XPO4Q9C0E2 1151 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 TNKS2Q9H2K2 1166 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 PARVAQ9NVD7 372 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 GPATCH2LQ9NWQ4 482 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 CNOT8Q9UFF9 292 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 SUSD2Q9UGT4 822 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 FZD10Q9ULW2 581 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 NEU3Q9UQ49 428 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 HS3ST2Q9Y278 367 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 PI4KAP42356 2102 aa13.15□□□□□ -0.3
TRAPPC4-205ENST00000525079 PCDH15Q96QU1 1955 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 DCHS1Q96JQ0 3298 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 A0A1W2PQJ5 194 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 MCF2LO15068 1137 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 BCAT2O15382 392 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 CREB3O43889 395 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 ZMPSTE24O75844 475 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 SYPP08247 313 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 GZMAP12544 262 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 GOT1P17174 413 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 ZBED6P86452 979 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 FOXK2Q01167 660 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 SFSWAPQ12872 951 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 EFHC2Q5JST6 749 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 HGSNATQ68CP4 663 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 KIAA0895LQ68EN5 471 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 NCEH1Q6PIU2 408 aa13.14□□□□□ -0.31
TRAPPC4-205ENST00000525079 ZNF783Q6ZMS7 281 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms