RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 EXOC2Q96KP1 924 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PPP1R9BQ96SB3 815 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PHOX2BQ99453 314 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 CEP41Q9BYV8 373 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 SLC2A11Q9BYW1 496 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 TM6SF2Q9BZW4 377 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PRSS16Q9NQE7 514 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 BCCIPQ9P287 314 aaKnown RBP eCLIP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 THAP10Q9P2Z0 257 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PPARGC1AQ9UBK2 798 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 MMP17Q9ULZ9 603 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 PLA2G4CQ9UP65 541 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 SLC8A2Q9UPR5 921 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 TBC1D30Q9Y2I9 924 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 HEY1Q9Y5J3 304 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 DENND4CQ5VZ89 1909 aa4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 KIF26AQ9ULI4 1882 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-202ENST00000524955 A0A0A0MRY4 1105 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 TCRBV7S2A1N4TA0A589 114 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 ILVBLA1L0T0 632 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 PRR23AA6NEV1 266 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 FAM47DPA6NHR8 397 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 GOLGA8CPA6NN73 597 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 BTNL10A8MVZ5 291 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 ENC1O14682 589 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 MUSKO15146 869 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 INSIG1O15503 277 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 DDX3YO15523 660 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 GALR2O43603 387 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 KRT86O43790 486 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SYNCRIPO60506 623 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SIN3BO75182 1162 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 ZMPSTE24O75844 475 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 TMCC1O94876 653 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 CD160O95971 181 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 ATP5BP06576 529 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 KRT7P08729 469 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 PYGMP11217 842 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 PECAM1P16284 738 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 NDUFV2P19404 249 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 CXCR5P32302 372 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 CDKN2BP42772 138 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SLC1A1P43005 524 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 RGRP47804 291 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 PSMD8P48556 350 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 MAPKAPK2P49137 400 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 CCR3P51677 355 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 NRLP54845 237 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 AIF1P55008 147 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 HADHBP55084 474 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 OXCT1P55809 520 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 MAXP61244 160 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 NRG1Q02297 640 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SEMG2Q02383 582 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 TCF15Q12870 199 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SERINC3Q13530 473 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 TCEAL1Q15170 157 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 PTPRRQ15256 657 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 CYTH1Q15438 398 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 DLG2Q15700 870 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 CRY1Q16526 586 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 FBXO43Q4G163 708 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 ODF2Q5BJF6 829 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 LRRC73Q5JTD7 316 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 ZNF569Q5MCW4 686 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 EOGTQ5NDL2 527 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 DCAF12L1Q5VU92 463 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SDE2Q6IQ49 451 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 TMCO3Q6UWJ1 677 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 NUDT18Q6ZVK8 323 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 ARMCX6Q7L4S7 300 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SETD3Q86TU7 594 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 MMAAQ8IVH4 418 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SLC35F6Q8N357 371 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 CCNYQ8ND76 341 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 MDGA1Q8NFP4 955 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 GRIN3AQ8TCU5 1115 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 WFIKKN2Q8TEU8 576 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 FRS2Q8WU20 508 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 UCMAQ8WVF2 138 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 PTPRN2Q92932 1015 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 EXOC4Q96A65 974 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 TTC17Q96AE7 1141 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 RNF157Q96PX1 679 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 LGMNQ99538 433 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 MAK16Q9BXY0 300 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 ACE2Q9BYF1 805 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 OSBPL6Q9BZF3 934 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 MKRN2Q9H000 416 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 TMEM245Q9H330 911 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 LRRC19Q9H756 370 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 CATSPERBQ9H7T0 1116 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SMARCAL1Q9NZC9 954 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SEPT10Q9P0V9 454 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SERGEFQ9UGK8 458 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 EBF1Q9UH73 591 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 IPO11Q9UI26 975 aaKnown RBP4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 SLC25A13Q9UJS0 675 aa4.7□□□□□ -1.66
CHMP4A-202ENST00000524955 AMFRQ9UKV5 643 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms