RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 AIF1P55008 147 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 SH3BGRP55822 239 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 BCAR1P56945 870 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 OSTNP61366 133 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 DYNLT1P63172 113 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 BASP1P80723 227 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 ID3Q02535 119 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PPARDQ03181 441 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 FAAP100Q0VG06 881 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 BST2Q10589 180 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 PRKG1Q13976 671 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 KRT81Q14533 505 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 EFTUD2Q15029 972 aaKnown RBP eCLIP5.2□□□□□ -1.58
SDC2-204ENST00000519914 C15orf59Q2T9L4 293 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 BBS9Q3SYG4 887 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 KBTBD12Q3ZCT8 623 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PLEKHG4Q58EX7 1191 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 LGSNQ5TDP6 509 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 C9orf57Q5W0N0 161 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 IQSEC1Q6DN90 963 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 SLC27A1Q6PCB7 646 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 NPNTQ6UXI9 565 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 FAM47EQ6ZV65 393 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 MARK2Q7KZI7 788 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 BZW1Q7L1Q6 419 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 DPH6Q7L8W6 267 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 NLRP9Q7RTR0 991 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 LRRC6Q86X45 466 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 DRAXINQ8NBI3 349 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 GSDMBQ8TAX9 411 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 UBA3Q8TBC4 463 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 AGAP11Q8TF27 550 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 FAM172AQ8WUF8 416 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 KBTBD7Q8WVZ9 684 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 STON2Q8WXE9 905 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 KCTD13Q8WZ19 329 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 HSPH1Q92598 858 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 ISL2Q96A47 359 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 CCDC74AQ96AQ1 378 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 ERP27Q96DN0 273 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PTCD3Q96EY7 689 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 CPB2Q96IY4 423 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PIWIL1Q96J94 861 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 SERAC1Q96JX3 654 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 SIGLEC10Q96LC7 697 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 ZNF560Q96MR9 790 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 ZMAT2Q96NC0 199 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 EBNA1BP2Q99848 306 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 MRPL45Q9BRJ2 306 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 TRIM55Q9BYV6 548 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 GCOM2Q9BZD3 368 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 DNAI2Q9GZS0 605 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 IQCGQ9H095 443 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 MMADHCQ9H3L0 296 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 STN1Q9H668 368 aaKnown RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 MANSC1Q9H8J5 431 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 KCNK13Q9HB14 408 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 MOCS1Q9NZB8 636 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PCSK1NQ9UHG2 260 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 CHMP2BQ9UQN3 213 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 AKT3Q9Y243 479 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 C15orf41Q9Y2V0 281 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PLLPQ9Y342 182 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PCDHA11Q9Y5I1 949 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.2□□□□□ -1.58
SDC2-204ENST00000519914 TRPM7Q96QT4 1865 aa5.2□□□□□ -1.58
SDC2-204ENST00000519914 PTPRDP23468 1912 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 MYO18AQ92614 2054 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 C9IYK1 514 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 GOLGA8MH3BSY2 632 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 H7C0C1 242 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 XPO1O14980 1071 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 KCNN4O15554 427 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 XPOTO43592 962 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 LPXNO60711 386 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 PEX11AO75192 247 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 KRT38O76015 456 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 ZBED1O96006 694 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 F2P00734 622 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 IGHA2P01877 340 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 LMNAP02545 664 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 VTNP04004 478 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 RNASE1P07998 156 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 DLDP09622 509 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 DARSP14868 501 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 CYP2F1P24903 491 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 ADORA2AP29274 412 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 CRHR1P34998 444 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 MAGEA12P43365 314 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 PSMC4P43686 418 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 ATP5OP48047 213 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 ZNF135P52742 658 aaPredicted RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 GJA9P57773 515 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 MRPS5P82675 430 aaKnown RBP5.19□□□□□ -1.58
SDC2-204ENST00000519914 OCRLQ01968 901 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 NIPAL4Q0D2K0 466 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SCAPQ12770 1279 aa5.19□□□□□ -1.58
SDC2-204ENST00000519914 SLC10A2Q12908 348 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms