RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 FAM92AA1XBS5 289 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 C10orf142B7Z368 130 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 H0YCG3 227 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PLRG1O43660 514 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 RNGTTO60942 597 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 PPP1R37O75864 691 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 KIF20AO95235 890 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ADH1BP00325 375 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PIGRP01833 764 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 CELA2BP08218 269 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 TCN2P20062 427 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PDCP20941 246 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 MUTP22033 750 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 HNRNPA2B1P22626 353 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 WARSP23381 471 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 CD82P27701 267 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 AKT2P31751 481 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 CSKP41240 450 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 LEPRP48357 1165 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 STK19P49842 368 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 COG7P83436 770 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TOB2Q14106 344 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 ERV3-1Q14264 604 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SMTNL2Q2TAL5 461 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 KMT5BQ4FZB7 885 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 MPPE1Q53F39 396 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ZRANB3Q5FWF4 1079 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 LCE2AQ5TA79 106 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 AGBL4Q5VU57 503 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 KRT79Q5XKE5 535 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 RFWD3Q6PCD5 774 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 GCNT7Q6ZNI0 430 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PAQR9Q6ZVX9 377 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 Q71RC1 249 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 KDELC2Q7Z4H8 507 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ZNF438Q7Z4V0 828 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TMEM135Q86UB9 458 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 NT5DC4Q86YG4 428 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 FAM177A1Q8N128 213 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 KYQ8NBH2 561 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PCDH19Q8TAB3 1148 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 WFIKKN2Q8TEU8 576 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 GLMNQ92990 594 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 KIAA1143Q96AT1 154 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 SMOQ99835 787 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 REEP2Q9BRK0 252 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 BOCQ9BWV1 1114 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SLC29A3Q9BZD2 475 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SLAMF7Q9NQ25 335 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 FAM49BQ9NUQ9 324 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 IL37Q9NZH6 218 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 KCNG1Q9UIX4 513 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ZNF510Q9Y2H8 683 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 OAS3Q9Y6K5 1087 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 FLNAP21333 2647 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 SPTY2D1-AS1A0A0U1RR47 76 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 LOC101059948A0A1B0GTJ6 334 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 A6NNZ2 444 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TMX2-CTNND1H3BSU7 103 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 RIOK3O14730 519 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 YY2O15391 372 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SPINT1O43278 529 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 RAD1O60671 282 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PRPF6O94906 941 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 FAM13AO94988 1023 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PCDH8O95206 1070 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PAK4O96013 591 aaPredicted RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 ANXA6P08133 673 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ITGB7P26010 798 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TAS2R38P59533 333 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 KRTAP10-9P60411 292 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 GUCY1B3Q02153 619 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 KCNA1Q09470 495 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ELAVL3Q14576 367 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 MAP9Q49MG5 647 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TPRG1LQ5T0D9 272 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SEL1L3Q68CR1 1132 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 ACOT1Q86TX2 421 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 TRIM69Q86WT6 500 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 FAM129CQ86XR2 697 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 MFN1Q8IWA4 741 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 FUKQ8N0W3 1084 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 KCTD17Q8N5Z5 321 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 C12orf29Q8N999 325 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 GLIS1Q8NBF1 620 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 SLC2A14Q8TDB8 520 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 GPBAR1Q8TDU6 330 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 BMFQ96LC9 184 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 INTS2Q9H0H0 1204 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 LRRN3Q9H3W5 708 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 PCIF1Q9H4Z3 704 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 CYP4F12Q9HCS2 524 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 LATS2Q9NRM7 1088 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 MARCH2Q9P0N8 246 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 INTS6Q9UL03 887 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 TPX2Q9ULW0 747 aaKnown RBP3.36□□□□□ -1.87
CHD1-211ENST00000514344 ABCA4P78363 2273 aa3.36□□□□□ -1.87
CHD1-211ENST00000514344 NSD1Q96L73 2696 aaPredicted RBP3.35□□□□□ -1.87
CHD1-211ENST00000514344 EDDM13A0A1B0GTR0 161 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms