RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SLC13A5Q86YT5 568 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 PSTKQ8IV42 348 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 RCOR2Q8IZ40 523 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 UBA3Q8TBC4 463 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 FAM71BQ8TC56 605 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 SPPL2BQ8TCT7 592 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 TEKT4Q8WW24 435 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 PCED1BQ96HM7 432 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 CAPZA3Q96KX2 299 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 CDC6Q99741 560 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 TRIM62Q9BVG3 475 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 B3GNT5Q9BYG0 378 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 FRMD8P1Q9BZ68 369 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 MIR1-1HGQ9H1L0 117 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 SLC6A17Q9H1V8 727 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 FAM49BQ9NUQ9 324 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 ARGLU1Q9NWB6 273 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 RRN3Q9NYV6 651 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 SUSD2Q9UGT4 822 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 FNDC3AQ9Y2H6 1198 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 TENM4Q6N022 2769 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 MYLKQ15746 1914 aa10.83□□□□□ -0.68
PDLIM5-217ENST00000512274 B8ZZF3 427 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 HHLA1C9JL84 531 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 ATP8B1O43520 1251 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 ATP2C2O75185 946 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 LRCH4O75427 683 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 RNF8O76064 485 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 ZRANB2O95218 330 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 FGGP02679 453 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 CYP17A1P05093 508 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 PDGFRBP09619 1106 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 CSH1P0DML2 217 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 CSH2P0DML3 217 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 PYGMP11217 842 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 CCDC130P13994 396 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 GPD1P21695 349 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 CHRNA3P32297 505 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 CETN2P41208 172 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 MATKP42679 507 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 AIF1P55008 147 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 KLF1Q13351 362 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 DHX34Q14147 1143 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 SMAD1Q15797 465 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 DDR2Q16832 855 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 HSF5Q4G112 596 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 C2CD6Q53TS8 623 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 TEX35Q5T0J7 233 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 FAM102AQ5T9C2 384 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 PM20D1Q6GTS8 502 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 VSTM1Q6UX27 236 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 STRADAQ7RTN6 431 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 MAATS1Q7Z4T9 603 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 DCP1BQ8IZD4 617 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 ZCCHC9Q8N567 271 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 JOSD2Q8TAC2 188 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 C2orf15Q8WU43 125 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 PGAP3Q96FM1 320 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 ZNF419Q96HQ0 510 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 BTBD6Q96KE9 485 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 SLC2A13Q96QE2 648 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 FAM129AQ9BZQ8 928 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 ZDHHC5Q9C0B5 715 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 LRRC19Q9H756 370 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 ARHGEF4Q9NR80 690 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 METTL5Q9NRN9 209 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 TMLHEQ9NVH6 421 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 TJP2Q9UDY2 1190 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 CHORDC1Q9UHD1 332 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 PCYOX1Q9UHG3 505 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 USP3Q9Y6I4 520 aa10.82□□□□□ -0.68
PDLIM5-217ENST00000512274 A0A1B0GTW7 788 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 FAM187AA6NFU0 413 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 MEI4A8MW99 385 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 F8VP50 259 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 TULP2O00295 520 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 KRIT1O00522 736 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 MDM4O15151 490 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 DAB1O75553 588 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 CER1O95813 267 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 HOXB2P14652 356 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 HDCP19113 662 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 NDUFV2P19404 249 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 PSMA2P25787 234 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 MARCKSL1P49006 195 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 DRG2P55039 364 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 TAS2R40P59535 323 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 ZXDBP98169 803 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 DHCR24Q15392 516 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 SIX1Q15475 284 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 HLA-BQ31612 363 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 BOLA3Q53S33 107 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 MDH1BQ5I0G3 518 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 WDR45BQ5MNZ6 344 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 C6orf118Q5T5N4 469 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 OR6B2Q6IFH4 312 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 SYDE1Q6ZW31 735 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 ARFGAP1Q8N6T3 406 aa10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 ZNF513Q8N8E2 541 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-217ENST00000512274 NAT16Q8N8M0 369 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms