RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081		A0A1W2PQC6	194 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	ILVBL	A1L0T0	632 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	ALOX15B	O15296	676 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	ADH1B	P00325	375 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	MT-CO1	P00395	513 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	KRT3	P12035	628 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	SRC	P12931	536 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	FER	P16591	822 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	DRD3	P35462	400 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	NOVA1	P51513	510 aa	Known RBP	12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	KRT83	P78385	493 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	PPP1R15B	Q5SWA1	713 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	KIAA0895L	Q68EN5	471 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	WDR59	Q6PJI9	974 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	ZNF783	Q6ZMS7	281 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	MON1B	Q7L1V2	547 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	FAM131B	Q86XD5	332 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	ZCCHC9	Q8N567	271 aa	Known RBP	12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	C3orf20	Q8ND61	904 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	OR2T34	Q8NGX1	318 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	VCPIP1	Q96JH7	1222 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	C11orf70	Q9BRQ4	267 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	GTPBP2	Q9BX10	602 aa	Known RBP	12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	KDM4C	Q9H3R0	1056 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	TM9SF3	Q9HD45	589 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	MPP6	Q9NZW5	540 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	SLC25A13	Q9UJS0	675 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	VPS28	Q9UK41	221 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	SARDH	Q9UL12	918 aa		12.45	□□□□□ -0.42
CLDND1-223	ENST00000511081	NYNRIN	Q9P2P1	1898 aa	Known RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	ZZEF1	O43149	2961 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081		A0A0D9SEW6	157 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081		A0A1B0GTH6	734 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081		A0A1W2PP55	124 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	FAM170A	A1A519	330 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	ZMPSTE24	O75844	475 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	CALB1	P05937	261 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	RHOC	P08134	193 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	CCDC172	P0C7W6	258 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	SDC4	P31431	198 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	NSF	P46459	744 aa	Known RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	GRIA4	P48058	902 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	ZNF165	P49910	485 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	CCR5	P51681	352 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	AFF3	P51826	1226 aa	Known RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	HDAC4	P56524	1084 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	ATP11A	P98196	1134 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	SLC20A2	Q08357	652 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	HNRNPD	Q14103	355 aa	Known RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	NR1I3	Q14994	352 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	C6orf118	Q5T5N4	469 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	ACAD10	Q6JQN1	1059 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	CAVIN1	Q6NZI2	390 aa	Known RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	IL27RA	Q6UWB1	636 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	PHLDB2	Q86SQ0	1253 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	HDDC3	Q8N4P3	179 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	DCAF4L2	Q8NA75	395 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	DEFB124	Q8NES8	71 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	OR2I1P	Q8NGU4	316 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	NTAN1	Q96AB6	310 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	OMD	Q99983	421 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	ACE2	Q9BYF1	805 aa	Predicted RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	EDEM3	Q9BZQ6	932 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	ZYG11B	Q9C0D3	744 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	MIR1-1HG	Q9H1L0	117 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	SLC32A1	Q9H598	525 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	EBF2	Q9HAK2	575 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	AIPL1	Q9NZN9	384 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	OR12D3	Q9UGF7	316 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	VPS51	Q9UID3	782 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	TPX2	Q9ULW0	747 aa	Known RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	WDFY3	Q8IZQ1	3526 aa		12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081	MAP1B	P46821	2468 aa	Known RBP	12.44	□□□□□ -0.42
CLDND1-223	ENST00000511081		A0A1W2PPC4	97 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	LRRC72	A6NJI9	287 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	FAM72C	H0Y354	149 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	SLC7A4	O43246	635 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	LAT	O43561	262 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	SNAP91	O60641	907 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	SRGAP2	O75044	1071 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	ZNF821	O75541	412 aa	Predicted RBP	12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	RNASEH2A	O75792	299 aa	Known RBP	12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	GJB6	O95452	261 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	IL1B	P01584	269 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	OR1E1	P30953	314 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	CSNK1E	P49674	416 aa	Known RBP	12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	ZNF143	P52747	638 aa	Predicted RBP	12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	RACK1	P63244	317 aa	Known RBP	12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	SCAP	Q12770	1279 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	KLHL40	Q2TBA0	621 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	HLA-B	Q31612	363 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	ARL13B	Q3SXY8	428 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	FAM72A	Q5TYM5	149 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	FAM46C	Q5VWP2	391 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	FAM72D	Q6L9T8	149 aa		12.43	□□□□□ -0.42
CLDND1-223	ENST00000511081	NCEH1	Q6PIU2	408 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms