RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 FAM170AA1A519 330 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 E9PAM4 449 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 F5H5T6 163 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 THAP12O43422 761 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 SMAD6O43541 496 aaKnown RBP13.75□□□□□ -0.21
DDX41-210ENST00000509576 SIGLEC6O43699 453 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 GADD45BO75293 160 aaPredicted RBP13.75□□□□□ -0.21
DDX41-210ENST00000509576 ZNF821O75541 412 aaPredicted RBP13.75□□□□□ -0.21
DDX41-210ENST00000509576 SMC2O95347 1197 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 APOEP02649 317 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 PRLRP16471 622 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 GLDCP23378 1020 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 GNA15P30679 374 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 ABCG1P45844 678 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 ACADSBP45954 432 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 DLG2Q15700 870 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 MEA1Q16626 185 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 C5orf22Q49AR2 442 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 PTPN20Q4JDL3 420 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 TRNP1Q6NT89 227 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 FOXR2Q6PJQ5 311 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 TRIM69Q86WT6 500 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 ERICH1Q86X53 443 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 IRF2BP1Q8IU81 584 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 SH2D3CQ8N5H7 860 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 CHST14Q8NCH0 376 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 RFFLQ8WZ73 363 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 NXPE2Q96DL1 559 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 GTPBP4Q9BZE4 634 aaKnown RBP13.75□□□□□ -0.21
DDX41-210ENST00000509576 SIX2Q9NPC8 291 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX41-210ENST00000509576 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 ZNF212Q9UDV6 495 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 CEP83Q9Y592 693 aa13.75□□□□□ -0.21
DDX41-210ENST00000509576 A0A1W2PNU3 283 aaPredicted RBP13.74□□□□□ -0.21
DDX41-210ENST00000509576 TYW5A2RUC4 315 aaKnown RBP13.74□□□□□ -0.21
DDX41-210ENST00000509576 CAPN9O14815 690 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 MCF2LO15068 1137 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 BRINP1O60477 761 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 PAGE1O75459 146 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 ADCY5O95622 1261 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 AFPP02771 609 aaKnown RBP13.74□□□□□ -0.21
DDX41-210ENST00000509576 C1SP09871 688 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 CKMT2P17540 419 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 ACP1P24666 158 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 SLC12A1Q13621 1099 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 FGL2Q14314 439 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 INAVAQ3KP66 663 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 TPRG1LQ5T0D9 272 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 TRIM65Q6PJ69 517 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 DCBLD1Q8N8Z6 715 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 C1orf131Q8NDD1 294 aaKnown RBP13.74□□□□□ -0.21
DDX41-210ENST00000509576 OR2A12Q8NGT7 310 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 SNIP1Q8TAD8 396 aaKnown RBP13.74□□□□□ -0.21
DDX41-210ENST00000509576 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
DDX41-210ENST00000509576 FAM204AQ9H8W3 233 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 PLCB1Q9NQ66 1216 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 TBC1D30Q9Y2I9 924 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 ATP6V1DQ9Y5K8 247 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 ACTL7AQ9Y615 435 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 BSNQ9UPA5 3926 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 COL6A6A6NMZ7 2263 aa13.74□□□□□ -0.21
DDX41-210ENST00000509576 A0A0D9SEW6 157 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 SLC31A1O15431 190 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 SART1O43290 800 aaKnown RBP13.73□□□□□ -0.21
DDX41-210ENST00000509576 MOCS3O95396 460 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 DGKAP23743 735 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 CLDN2P57739 230 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 ZNF284Q2VY69 593 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 RAB6CQ53S08 254 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 RNF219Q5W0B1 726 aaPredicted RBP13.73□□□□□ -0.21
DDX41-210ENST00000509576 SEL1L3Q68CR1 1132 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 GCNT7Q6ZNI0 430 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 ELOA2Q8IYF1 753 aaPredicted RBP13.73□□□□□ -0.21
DDX41-210ENST00000509576 ATP6V0D2Q8N8Y2 350 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 OR13H1Q8NG92 308 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 OR8D1Q8WZ84 308 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 SHC3Q92529 594 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 RPRD1AQ96P16 312 aaPredicted RBP13.73□□□□□ -0.21
DDX41-210ENST00000509576 NRSN2Q9GZP1 204 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 RAB6CQ9H0N0 254 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 GPR27Q9NS67 375 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 HS3ST2Q9Y278 367 aa13.73□□□□□ -0.21
DDX41-210ENST00000509576 SCN8AQ9UQD0 1980 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 A0A1W2PQU0 124 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 RAD51BO15315 384 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 YKT6O15498 198 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 SLC7A4O43246 635 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 RNGTTO60942 597 aaKnown RBP13.72□□□□□ -0.21
DDX41-210ENST00000509576 RRM1P23921 792 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 ARRB1P49407 418 aaPredicted RBP13.72□□□□□ -0.21
DDX41-210ENST00000509576 TLE3Q04726 772 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 NME3Q13232 169 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 ARHGAP44Q17R89 818 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 C6orf118Q5T5N4 469 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 CDCP2Q5VXM1 449 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 LINGO4Q6UY18 593 aa13.72□□□□□ -0.21
DDX41-210ENST00000509576 PRPF39Q86UA1 669 aaKnown RBP13.72□□□□□ -0.21
DDX41-210ENST00000509576 IQCHQ86VS3 1027 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms