RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 SFXN1Q9H9B4 322 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 EIF2B3Q9NR50 452 aaKnown RBP12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 NINJ2Q9NZG7 142 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 VPS18Q9P253 973 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 GBF1Q92538 1859 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 SOBPA7XYQ1 873 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 AGPSO00116 658 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 TBL1XO60907 577 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 ACSL3O95573 720 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 TTC4O95801 387 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 RHOCP08134 193 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 NUDT17P0C025 328 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 NFKB1P19838 968 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 EIF3BP55884 814 aaKnown RBP12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 SARNPP82979 210 aaKnown RBP12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 CDK16Q00536 496 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 SERINC3Q13530 473 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 BBS9Q3SYG4 887 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 FNBP1LQ5T0N5 605 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 LEKR1Q6ZMV7 388 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 FAM217AQ8IXS0 508 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 OR2W6PQ8NHA6 318 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 ZSCAN18Q8TBC5 510 aaPredicted RBP12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 SH3RF2Q8TEC5 729 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 NSMCE1Q8WV22 266 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 MAML1Q92585 1016 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 FATE1Q969F0 183 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 C9orf72Q96LT7 481 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 TTC25Q96NG3 672 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 SERPINB12Q96P63 405 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 IL12RB2Q99665 862 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 MAGEH1Q9H213 219 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 DZANK1Q9NVP4 752 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 ZMYM5Q9UJ78 669 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 TTLL3Q9Y4R7 772 aa12.88□□□□□ -0.35
LYSMD3-204ENST00000509384 CEP290O15078 2479 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 GOLGA8KD6RF30 607 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 E7ESA3 106 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 J3KR12 359 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 RFXAPO00287 272 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 ALOX15BO15296 676 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 CEBPBP17676 345 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 CD68P34810 354 aaPredicted RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 ACVRL1P37023 503 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 RENBPP51606 427 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 GNA12Q03113 381 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 IL10RBQ08334 325 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 MTM1Q13496 603 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 SLC29A2Q14542 456 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 PRPSAP1Q14558 356 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 FASTKD3Q14CZ7 662 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 KYNUQ16719 465 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 MSS51Q4VC12 460 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 DNAJC21Q5F1R6 531 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 UBAP2Q5T6F2 1119 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 TMC5Q6UXY8 1006 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 SETD3Q86TU7 594 aaPredicted RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 BBS7Q8IWZ6 715 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 CPXM2Q8N436 756 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 PDCD7Q8N8D1 485 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 VN1R2Q8NFZ6 395 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 UHMK1Q8TAS1 419 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 PABPC5Q96DU9 382 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 TMA16Q96EY4 203 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 XAB2Q9HCS7 855 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 RBM22Q9NW64 420 aaKnown RBP eCLIP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 NFS1Q9Y697 457 aa12.87□□□□□ -0.35
LYSMD3-204ENST00000509384 E2F8A0AVK6 867 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 GOLGA6CA6NDK9 693 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 GOLGA6L10A6NI86 522 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 GFRA2O00451 464 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 PRAMEF11O60813 436 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 RNF40O75150 1001 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 BANF1O75531 89 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 PEX11BO96011 259 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 SHBGP04278 402 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 GOLGA6DP0CG33 693 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 ETFBP38117 255 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 HNRNPDQ14103 355 aaKnown RBP12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 HP1BP3Q5SSJ5 553 aaPredicted RBP12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 CEP85LQ5SZL2 805 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 IL31Q6EBC2 164 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 ANKMY2Q8IV38 441 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 CARNMT1Q8N4J0 409 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 CNTD1Q8N815 330 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 TDRD5Q8NAT2 981 aaKnown RBP12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 PYROXD1Q8WU10 500 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 ING5Q8WYH8 240 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 ARHGEF2Q92974 986 aaKnown RBP12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 USP13Q92995 863 aaPredicted RBP12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 PPP1R2P1Q96PQ5 205 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 SH3GL2Q99962 352 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 IGFLR1Q9H665 355 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 GLOD4Q9HC38 313 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 TDP1Q9NUW8 608 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 GOLGA6AQ9NYA3 693 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms