RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 PSMG3-AS1Q96PY0 264 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 DUSP23Q9BVJ7 150 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 ABCG4Q9H172 646 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 STARD5Q9NSY2 213 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 USP25Q9UHP3 1055 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 SARDHQ9UL12 918 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 MAN2B2Q9Y2E5 1009 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 COQ4Q9Y3A0 265 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 PCDHGA8Q9Y5G5 932 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 UNC13CQ8NB66 2214 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 SCN8AQ9UQD0 1980 aa9.68□□□□□ -0.86
NEDD9-211ENST00000508546 LY6G6EA0A0G2JKS1 128 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 NEMP2A6NFY4 417 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 CDRT15L2A8MXV6 281 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 C1QTNF3-AMACRE9PGA6 284 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 SCAMP1O15126 338 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 FFAR2O15552 330 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 SUV39H1O43463 412 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 FBXO21O94952 628 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 RHOBTB3O94955 611 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 FYNP06241 537 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 RBMS1P29558 406 aaKnown RBP9.67□□□□□ -0.86
NEDD9-211ENST00000508546 MLLT3P42568 568 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-211ENST00000508546 ME1P48163 572 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 CNTN1Q12860 1018 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 CUL2Q13617 745 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 ZCWPW2Q504Y3 356 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 PMF1Q6P1K2 205 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 XKR5Q6UX68 686 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 LGI2Q8N0V4 545 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 GUF1Q8N442 669 aaKnown RBP9.67□□□□□ -0.86
NEDD9-211ENST00000508546 UBR7Q8N806 425 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 FAM174AQ8TBP5 190 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 DQX1Q8TE96 717 aaKnown RBP9.67□□□□□ -0.86
NEDD9-211ENST00000508546 ERCC4Q92889 916 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-211ENST00000508546 PRR11Q96HE9 360 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-211ENST00000508546 HSFY1Q96LI6 401 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 PPM1HQ9ULR3 514 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 SATB2Q9UPW6 733 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 CA5BQ9Y2D0 317 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 U3KQA8 63 aa9.67□□□□□ -0.86
NEDD9-211ENST00000508546 DOCK4Q8N1I0 1966 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 A0A1W2PNU3 283 aaPredicted RBP9.66□□□□□ -0.86
NEDD9-211ENST00000508546 K7ESM1 405 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 MCF2LO15068 1137 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 ATP9BO43861 1147 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 PAEPP09466 180 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 HNRNPA2B1P22626 353 aaKnown RBP9.66□□□□□ -0.86
NEDD9-211ENST00000508546 RGS7P49802 495 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 OXCT1P55809 520 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 TAS2R38P59533 333 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 HNRNPKP61978 463 aaKnown RBP eCLIP9.66□□□□□ -0.861e-6■■□□□ 11.4
NEDD9-211ENST00000508546 TLE1Q04724 770 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 STILQ15468 1287 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 CNGA2Q16280 664 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 ZNF284Q2VY69 593 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 EDRF1Q3B7T1 1238 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 ARL13BQ3SXY8 428 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 POM121L1PQ3SYA9 428 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 C3orf38Q5JPI3 329 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 ATL3Q6DD88 541 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 CCDC81Q6ZN84 652 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 BEND5Q7L4P6 421 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 ABI3BPQ7Z7G0 1075 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 CLEC14AQ86T13 490 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 DCP2Q8IU60 420 aaKnown RBP9.66□□□□□ -0.86
NEDD9-211ENST00000508546 OR13H1Q8NG92 308 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 TPCN2Q8NHX9 752 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 IFI44Q8TCB0 444 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 MAPK15Q8TD08 544 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 CLEC4CQ8WTT0 213 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 TFAP2BQ92481 460 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 CCDC47Q96A33 483 aaKnown RBP9.66□□□□□ -0.86
NEDD9-211ENST00000508546 BTN2A3PQ96KV6 586 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 PPP1R9BQ96SB3 815 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 NCKIPSDQ9NZQ3 722 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 XPO7Q9UIA9 1087 aaKnown RBP9.66□□□□□ -0.86
NEDD9-211ENST00000508546 ENTPD2Q9Y5L3 495 aa9.66□□□□□ -0.86
NEDD9-211ENST00000508546 A0A1W2PQU0 124 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 BLACEA4D250 179 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 TCAF2A6NFQ2 919 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 PIK3R2O00459 728 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 SLC31A1O15431 190 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 TCEA3O75764 348 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 MOCS2O96007 188 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 APOEP02649 317 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 EPB41P11171 864 aaKnown RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 PDGFRAP16234 1089 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 PRLRP16471 622 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 TACR2P21452 398 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 TGM2P21980 687 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 TBXAS1P24557 533 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 AKT2P31751 481 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 RPL34P49207 117 aaKnown RBP9.65□□□□□ -0.86
NEDD9-211ENST00000508546 NUCB2P80303 420 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CCDC15Q0P6D6 951 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CBWD6Q4V339 395 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CBWD3Q5JTY5 395 aa9.65□□□□□ -0.86
NEDD9-211ENST00000508546 CBWD5Q5RIA9 395 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms