RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SPASTQ9UBP0 616 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 LCMT1Q9UIC8 334 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PACSIN2Q9UNF0 486 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 FHOD1Q9Y613 1164 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PDE2AO00408 941 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 EBAG9O00559 213 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SLC16A3O15427 465 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CYP26A1O43174 497 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PPP1R11O60927 126 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF189O75820 626 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PSMD10O75832 226 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ANXA5P08758 320 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ENO2P09104 434 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ALOX15P16050 662 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CCR1P32246 355 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 POLR2LP62875 67 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 EXOSC10Q01780 885 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CYP24A1Q07973 514 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SIGLEC14Q08ET2 396 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SPIDRQ14159 915 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TBC1D25Q3MII6 688 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 FAM26DQ5JW98 314 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RESP18Q5W5W9 173 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RAP1GAP2Q684P5 730 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 LAYNQ6UX15 382 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ARL14Q8N4G2 192 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 DENND6BQ8NEG7 585 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SLC22A17Q8WUG5 538 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ELSPBP1Q96BH3 223 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 EEF2KMTQ96G04 330 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ELMO2Q96JJ3 720 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SERAC1Q96JX3 654 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 DEPDC7Q96QD5 511 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NAPGQ99747 312 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CDHR5Q9HBB8 845 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SAMSN1Q9NSI8 373 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ABI3Q9P2A4 366 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 KLQ9UEF7 1012 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 FBXL5Q9UKA1 691 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MTF2Q9Y483 593 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PCDHB3Q9Y5E6 796 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CYP3A7-CYP3A51PA0A087WV96 503 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SHISA7A6NL88 538 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 HIDE1A8MVS5 230 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 VSTM5A8MXK1 200 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TULP2O00295 520 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 DIAPH2O60879 1101 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SRFP11831 508 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SLC2A4P14672 509 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZFXP17010 805 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CYP3A7P24462 503 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 HMOX2P30519 316 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MSH2P43246 934 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TNFRSF4P43489 277 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 PXNP49023 591 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 GPR15P49685 360 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RAP1GDS1P52306 607 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 LRRC63Q05C16 580 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ITGB3BPQ13352 177 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ART3Q13508 389 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 RUNX3Q13761 415 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MTF1Q14872 753 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ST3GAL2Q16842 350 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TTLL9Q3SXZ7 439 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 BOLA3Q53S33 107 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 INTS6LQ5JSJ4 861 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF776Q68DI1 518 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ALG1LQ6GMV1 187 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TFAP2DQ7Z6R9 452 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 GUF1Q8N442 669 aaKnown RBP3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SLC25A41Q8N5S1 370 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ANKRD42Q8N9B4 389 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF248Q8NDW4 579 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM58Q8NG06 486 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 MGARPQ8TDB4 240 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 WFIKKN2Q8TEU8 576 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 LRIG1Q96JA1 1093 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NUP85Q9BW27 656 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM9Q9C026 710 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 NIF3L1Q9GZT8 377 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 GDF3Q9NR23 364 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 TDP1Q9NUW8 608 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 DDIT4Q9NX09 232 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 CPQQ9Y646 472 aa3.02□□□□□ -1.93
NEDD4-208ENST00000508342 SNTNA6NMZ2 147 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 EML1O00423 815 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 NARSO43776 548 aaKnown RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 DNAJC8O75937 253 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 TJP3O95049 919 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 GRK2P25098 689 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 GPR1P46091 355 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 GNPDA1P46926 289 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 BLKP51451 505 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ALDH18A1P54886 795 aaKnown RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 HNRNPH2P55795 449 aaKnown RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 LRRC23Q53EV4 343 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-208ENST00000508342 NT5DC1Q5TFE4 455 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 LAIR1Q6GTX8 287 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 SLC2A14Q8TDB8 520 aa3.01□□□□□ -1.93
NEDD4-208ENST00000508342 ACMSDQ8TDX5 336 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms