RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 FBXO21O94952 628 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 BMP10O95393 424 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PGM3O95394 542 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 METTL18O95568 372 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GSRP00390 522 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CAPNS1P04632 268 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TFAP2AP05549 437 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 MCF2P10911 925 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ETS2P15036 469 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF23P17027 643 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GLDCP23378 1020 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PIK3R1P27986 724 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TNFSF9P41273 254 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GRIA2P42262 883 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ACADSBP45954 432 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PHKA2P46019 1235 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GLUD2P49448 558 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC26A2P50443 739 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDK9P50750 372 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 RPL14P50914 215 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF135P52742 658 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 LIMK2P53671 638 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 COG7P83436 770 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 POU5F1BQ06416 359 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 INCA1Q0VD86 236 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 LAMTOR4Q0VGL1 99 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 IFRD2Q12894 506 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 STX5Q13190 355 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CLN3Q13286 438 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 MTM1Q13496 603 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRKG1Q13976 671 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TAF5Q15542 800 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 UGP2Q16851 508 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF423Q2M1K9 1284 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GOLGA7BQ2TAP0 167 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 NADK2Q4G0N4 442 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PIGGQ5H8A4 983 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CES4AQ5XG92 561 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ITPRIPL1Q6GPH6 555 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 KRT80Q6KB66 452 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 RWDD4Q6NW29 188 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 C16orf46Q6P387 395 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 FBXL19Q6PCT2 694 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRMT10BQ6PF06 316 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 KCNT2Q6UVM3 1135 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZYG11AQ6WRX3 759 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 FRMD7Q6ZUT3 714 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAM183BPQ6ZVS7 135 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CYP4V2Q6ZWL3 525 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF534Q76KX8 674 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRICKLE2Q7Z3G6 844 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 MAVSQ7Z434 540 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF554Q86TJ5 538 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 RSPH3Q86UC2 560 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 SNX32Q86XE0 403 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRIM50Q86XT4 487 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TICAM1Q8IUC6 712 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 DSELQ8IZU8 1212 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PHTF2Q8N3S3 785 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PACRGLQ8N7B6 248 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GOLM1Q8NBJ4 401 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 HIPK4Q8NE63 616 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 TSPAN14Q8NG11 270 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GABPB2Q8TAK5 448 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 SEPT1Q8WYJ6 367 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PBXIP1Q96AQ6 731 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 EME1Q96AY2 570 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ATG4CQ96DT6 458 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CERS2Q96G23 380 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 HPDLQ96IR7 371 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 C12orf42Q96LP6 360 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CNBD2Q96M20 576 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF778Q96MU6 729 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PPP1R2P1Q96PQ5 205 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDRT15Q96T59 188 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 RBBP8Q99708 897 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CCT7Q99832 543 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 NFKBIZQ9BYH8 718 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 GLIS2Q9BZE0 524 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 INO80BQ9C086 356 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 C20orf27Q9GZN8 174 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 ELOVL4Q9GZR5 314 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 IL22Q9GZX6 179 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 DRC3Q9H069 523 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 RBM38Q9H0Z9 239 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 CCDC68Q9H2F9 335 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 SNX25Q9H3E2 840 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 WDR41Q9HAD4 459 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 UGT1A7Q9HAW7 530 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 UGT1A10Q9HAW8 530 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 UGT1A8Q9HAW9 530 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PLAC1Q9HBJ0 212 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 MRM3Q9HC36 420 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PREBQ9HCU5 417 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PICK1Q9NRD5 415 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 SNX15Q9NRS6 342 aa5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRMT7Q9NVM4 692 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 DNAAF2Q9NVR5 837 aaKnown RBP5.06□□□□□ -1.6
HMGB3P16-201ENST00000508037 PNPOQ9NVS9 261 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms